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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 3
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc02g086840.2.1
Solyc03g096650.1.1
Solyc06g065650.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Solyc03g096650.1.1 AT2G29310.1 21798944
AT2G30540.1 Solyc02g086840.2.1 AT3G27960.1 21798944
AT2G30540.1 Solyc06g065650.2.1 AT4G32570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400029673 Potato cytosol 83.96 83.96
Solyc06g008760.1.1 Tomato cytosol 65.09 68.32
VIT_07s0104g01390.t01 Wine grape plasma membrane 62.26 64.71
KRG96386 Soybean cytosol 60.38 63.37
KRH68125 Soybean cytosol 60.38 63.37
Bra031540.1-P Field mustard cytosol 58.49 62.63
CDY06230 Canola cytosol 58.49 62.63
CDY09953 Canola cytosol 58.49 62.63
CDY10229 Canola cytosol 58.49 62.63
CDY54881 Canola cytosol 58.49 62.63
KRH31919 Soybean cytosol, plasma membrane 59.43 62.38
KRH71536 Soybean extracellular 59.43 62.38
AT1G06830.1 Thale cress cytosol 57.55 61.62
Bra004424.1-P Field mustard cytosol 58.49 60.78
CDX80139 Canola cytosol 58.49 60.78
CDX95739 Canola cytosol 58.49 60.78
CDY23990 Canola cytosol 58.49 60.78
CDY53024 Canola cytosol 58.49 60.78
AT2G30540.1 Thale cress cytosol 57.55 59.8
AT2G47880.1 Thale cress cytosol 57.55 59.8
Bra018307.1-P Field mustard cytosol 57.55 59.8
CDX84825 Canola cytosol 57.55 59.8
CDY10745 Canola cytosol 57.55 59.8
Bra007718.1-P Field mustard cytosol 56.6 58.82
Bra021641.1-P Field mustard cytosol 56.6 58.82
CDY11466 Canola cytosol 56.6 58.82
CDY29666 Canola cytosol 56.6 58.82
CDY52638 Canola cytosol 56.6 58.82
CDY27469 Canola cytosol 57.55 58.1
CDY55528 Canola cytosol 57.55 58.1
AT3G62960.1 Thale cress cytosol 55.66 57.84
Bra003517.1-P Field mustard cytosol, extracellular 55.66 57.84
Bra014379.1-P Field mustard cytosol 55.66 57.84
CDX76678 Canola cytosol 55.66 57.84
CDX89162 Canola cytosol 55.66 57.84
CDX97824 Canola cytosol 55.66 57.84
CDY68061 Canola cytosol 55.66 57.84
Bra021444.1-P Field mustard cytosol 56.6 57.14
EES00745 Sorghum cytosol 50.94 52.43
Os01t0368900-01 Rice cytosol 50.94 52.43
TraesCS5B01G100900.1 Wheat cytosol 50.0 51.46
Zm00001d040837_P001 Maize cytosol 50.0 51.46
EES00746 Sorghum cytosol 49.06 50.49
TraesCS5A01G094700.1 Wheat cytosol 49.06 50.49
TraesCS5D01G107200.1 Wheat cytosol 49.06 50.49
Solyc01g067460.1.1 Tomato cytosol 48.11 50.0
Zm00001d027695_P001 Maize cytosol 49.06 50.0
HORVU5Hr1G025680.1 Barley cytosol 48.11 49.51
GSMUA_Achr11P... Banana cytosol 47.17 48.54
GSMUA_Achr1P26720_001 Banana cytosol 47.17 48.54
GSMUA_Achr8P33660_001 Banana cytosol 47.17 48.54
HORVU5Hr1G010960.1 Barley cytosol 47.17 48.54
TraesCS5A01G044700.1 Wheat cytosol 47.17 48.54
TraesCS5B01G048900.1 Wheat cytosol 47.17 48.54
TraesCS5D01G054000.1 Wheat cytosol 47.17 48.54
TraesCS5D01G054800.1 Wheat cytosol 47.17 48.54
Zm00001d040836_P001 Maize cytosol 47.17 48.54
GSMUA_Achr11P... Banana cytosol, extracellular 46.23 47.57
GSMUA_Achr8P09970_001 Banana cytosol 46.23 47.57
TraesCS5A01G044100.1 Wheat cytosol 46.23 47.57
TraesCS5B01G048300.1 Wheat cytosol 46.23 47.57
TraesCS5B01G101100.1 Wheat cytosol, extracellular 46.23 47.57
EES02025 Sorghum cytosol 47.17 46.73
GSMUA_Achr11P... Banana cytosol, extracellular 45.28 46.6
GSMUA_AchrUn_... Banana cytosol, extracellular 45.28 46.6
HORVU5Hr1G010870.1 Barley cytosol 45.28 46.6
HORVU5Hr1G025710.1 Barley cytosol, extracellular 45.28 46.6
TraesCS5A01G044400.1 Wheat cytosol 45.28 46.6
TraesCS5A01G044900.1 Wheat cytosol 45.28 46.6
TraesCS5B01G048400.1 Wheat cytosol 45.28 46.6
TraesCS5B01G048600.1 Wheat cytosol 45.28 46.6
TraesCS5B01G101600.1 Wheat cytosol, extracellular 45.28 46.6
TraesCS5D01G054200.1 Wheat cytosol 45.28 46.6
TraesCS5D01G054400.1 Wheat cytosol 45.28 46.6
TraesCS5D01G054900.1 Wheat cytosol 45.28 46.6
TraesCS5D01G055100.1 Wheat cytosol 45.28 46.6
TraesCS5D01G107500.1 Wheat cytosol, extracellular 45.28 46.6
TraesCS5D01G108100.1 Wheat cytosol, extracellular 45.28 46.6
TraesCS5B01G049000.1 Wheat cytosol 37.74 46.51
HORVU5Hr1G025610.1 Barley cytosol 45.28 46.15
TraesCS5A01G094600.1 Wheat cytosol 45.28 46.15
GSMUA_Achr5P00380_001 Banana extracellular 44.34 45.63
Os12t0538600-00 Rice cytosol, extracellular 44.34 45.63
TraesCS5A01G045000.1 Wheat cytosol 44.34 45.63
TraesCS5A01G094900.1 Wheat extracellular 44.34 45.63
TraesCS5A01G095500.1 Wheat cytosol 44.34 45.63
TraesCS5B01G049100.1 Wheat cytosol 44.34 45.63
TraesCS5B01G049200.1 Wheat cytosol 44.34 45.63
TraesCS5D01G055000.1 Wheat cytosol 44.34 45.63
TraesCS5B01G100700.1 Wheat cytosol 44.34 45.19
TraesCS5D01G106900.1 Wheat cytosol 44.34 45.19
Zm00001d023873_P001 Maize cytosol 44.34 45.19
GSMUA_Achr5P00370_001 Banana cytosol 43.4 44.66
HORVU5Hr1G010950.1 Barley cytosol 43.4 44.66
TraesCS5A01G044800.1 Wheat cytosol 43.4 44.66
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 43.4 44.23
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 43.4 44.23
Solyc04g011820.1.1 Tomato cytosol 39.62 44.21
Zm00001d042187_P001 Maize cytosol 46.23 44.14
EES16092 Sorghum cytosol 43.4 43.81
GSMUA_Achr7P03690_001 Banana cytosol 42.45 43.69
Solyc06g054570.1.1 Tomato cytosol 42.45 43.69
TraesCS3A01G463000.1 Wheat cytosol 42.45 43.27
TraesCS3B01G504700.1 Wheat cytosol 42.45 43.27
TraesCS3D01G456900.1 Wheat cytosol 42.45 43.27
TraesCS5A01G094500.1 Wheat cytosol 42.45 43.27
TraesCS5B01G100600.1 Wheat cytosol 42.45 43.27
TraesCS5D01G106800.1 Wheat cytosol 42.45 43.27
Zm00001d023870_P001 Maize cytosol, extracellular 42.45 43.27
Os11t0656000-00 Rice cytosol, plastid 44.34 43.12
Os05t0149950-00 Rice cytosol, mitochondrion 46.23 42.98
HORVU5Hr1G033140.1 Barley cytosol 42.45 42.86
HORVU3Hr1G099090.1 Barley cytosol 41.51 42.31
TraesCS3A01G462200.1 Wheat cytosol 41.51 42.31
TraesCS3B01G506500.1 Wheat cytosol 41.51 42.31
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 41.51 42.31
Os11t0656400-00 Rice cytosol, plastid 43.4 42.2
Os11t0656700-00 Rice cytosol, plastid 43.4 42.2
Solyc01g067440.2.1 Tomato cytosol 40.57 42.16
Solyc04g053110.1.1 Tomato cytosol 40.57 42.16
TraesCS5D01G107300.1 Wheat cytosol 40.57 41.75
TraesCS3A01G462900.1 Wheat cytosol, extracellular 40.57 41.35
TraesCS3A01G463200.1 Wheat cytosol 40.57 41.35
TraesCS3B01G505300.1 Wheat cytosol 40.57 41.35
TraesCS3B01G506200.1 Wheat cytosol 40.57 41.35
TraesCS3D01G457200.1 Wheat cytosol 40.57 41.35
Solyc04g011790.1.1 Tomato cytosol, plastid 39.62 41.18
Solyc04g011860.1.1 Tomato cytosol, plastid 39.62 41.18
Solyc04g011870.1.1 Tomato cytosol, plastid 39.62 41.18
OQU79243 Sorghum cytosol 41.51 41.12
Solyc05g051730.1.1 Tomato cytosol 39.62 40.78
TraesCS5B01G101000.1 Wheat cytosol 39.62 40.78
Os12t0538700-01 Rice cytosol 39.62 40.38
TraesCS3B01G506400.1 Wheat cytosol 39.62 40.38
Zm00001d023869_P001 Maize cytosol 39.62 40.38
Solyc04g011780.1.1 Tomato extracellular 38.68 40.2
Solyc04g011810.1.1 Tomato cytosol, plastid 38.68 40.2
Solyc04g011830.1.1 Tomato cytosol, plastid 38.68 40.2
Solyc04g011850.1.1 Tomato cytosol 38.68 40.2
Solyc06g008750.1.1 Tomato cytosol 38.68 40.2
EES16097 Sorghum cytosol 40.57 40.19
HORVU3Hr1G099150.1 Barley cytosol, extracellular 24.53 40.0
Zm00001d023872_P001 Maize cytosol, mitochondrion 39.62 40.0
Zm00001d048719_P001 Maize cytosol 41.51 40.0
TraesCS5A01G094800.1 Wheat cytosol 38.68 39.81
Solyc05g051720.1.1 Tomato cytosol 38.68 39.42
TraesCS4D01G147300.1 Wheat cytosol 38.68 39.42
Solyc04g011800.1.1 Tomato cytosol, plastid 37.74 39.22
Solyc04g011840.1.1 Tomato cytosol 37.74 39.22
Solyc04g011880.1.1 Tomato cytosol, plastid 37.74 39.22
Solyc09g074580.1.1 Tomato cytosol 37.74 39.22
Solyc09g074590.1.1 Tomato cytosol 37.74 39.22
EES16096 Sorghum cytosol 38.68 39.05
Zm00001d048720_P001 Maize cytosol 40.57 38.74
Bra015532.1-P Field mustard cytosol 52.83 38.62
HORVU5Hr1G025690.1 Barley cytosol 40.57 38.39
Solyc09g074600.1.1 Tomato cytosol 36.79 38.24
EES16093 Sorghum cytosol 37.74 38.1
HORVU3Hr1G099050.2 Barley cytosol 38.68 37.96
Os11t0655900-01 Rice extracellular 38.68 37.96
Solyc01g009900.2.1 Tomato cytosol, plastid 42.45 37.5
EES08918 Sorghum cytosol, plastid 36.79 37.14
EES17138 Sorghum cytosol 36.79 36.79
CDY71728 Canola cytosol 49.06 36.62
TraesCS3A01G462800.1 Wheat extracellular 28.3 36.59
TraesCS3B01G506000.1 Wheat mitochondrion 28.3 36.59
Solyc01g009910.1.1 Tomato mitochondrion, plastid 40.57 35.83
EES08919 Sorghum cytosol 36.79 35.78
Os01t0936000-00 Rice cytosol 41.51 35.2
Solyc01g009890.1.1 Tomato cytosol, plastid 42.45 34.62
Solyc05g015910.1.1 Tomato cytosol 42.45 34.35
HORVU5Hr1G025560.1 Barley cytosol 42.45 33.09
HORVU0Hr1G010190.2 Barley cytosol 29.25 29.52
CDX97821 Canola mitochondrion 34.91 27.82
Solyc08g036570.1.1 Tomato cytosol 32.08 26.98
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:IPR002109UniProt:K4CV34PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF57
SUPFAM:SSF52833EnsemblPlantsGene:Solyc09g074570.1EnsemblPlants:Solyc09g074570.1.1TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI000276B58A
Description
No Description!
Coordinates
chr9:-:66385499..66385819
Molecular Weight (calculated)
11664.4 Da
IEP (calculated)
7.439
GRAVY (calculated)
0.259
Length
106 amino acids
Sequence
(BLAST)
001: MDKVQRMARD HGVVIFSKST CCLSYAVSVL FKDLGVVPYV CQIDHEPDGK EMEKALIRMG VNSSFLFPAV FIGGSLLGST NEVMSLHLQG SLNQLIQPYI
101: SILKSN
Best Arabidopsis Sequence Match ( AT2G47880.1 )
(BLAST)
001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY
Arabidopsis Description
GRXC13Glutaredoxin-C13 [Source:UniProtKB/Swiss-Prot;Acc:O82255]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.