Factsheet for TraesCS3B01G506000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G284200.2
TraesCS2A01G504600.1
TraesCS2B01G301100.1
TraesCS2D01G283100.2
TraesCS2D01G505300.1
TraesCS3A01G435100.1
TraesCS3A01G536400.1
TraesCS3B01G470100.1
TraesCS3B01G607500.1
TraesCS3D01G541800.1
TraesCS4B01G319100.1
TraesCS4D01G315600.1
TraesCS5A01G493100.1
TraesCS6A01G274500.1
TraesCS6A01G324500.1
TraesCS6A01G412800.1
TraesCS6B01G302000.1
TraesCS6B01G354900.3
TraesCS6B01G462100.1
TraesCS6D01G254800.1
TraesCS6D01G304300.1
TraesCS6D01G397000.1
TraesCS7A01G167900.1
TraesCS7B01G072700.1
TraesCS7D01G168700.1
TraesCSU01G150000.1
TraesCSU01G244000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT4G15700.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS6A01G324500.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS6B01G354900.3	AT1G73360.1	21798944
AT4G15700.1	TraesCS6D01G304300.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7A01G167900.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7B01G072700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7D01G168700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G150000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G244000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS6A01G412800.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6B01G462100.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6D01G397000.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G462800.1	Wheat	extracellular	92.68	92.68
TraesCS3B01G506500.1	Wheat	cytosol	85.37	67.31
TraesCS3B01G506400.1	Wheat	cytosol	84.15	66.35
TraesCS3B01G504700.1	Wheat	cytosol	81.71	64.42
TraesCS3B01G505300.1	Wheat	cytosol	80.49	63.46
TraesCS3B01G506200.1	Wheat	cytosol	80.49	63.46
EES02025	Sorghum	cytosol	73.17	56.07
GSMUA_Achr8P09970_001	Banana	cytosol	67.07	53.4
Zm00001d042187_P001	Maize	cytosol	70.73	52.25
Os01t0936000-00	Rice	cytosol	78.05	51.2
GSMUA_Achr11P...	Banana	cytosol, extracellular	63.41	50.49
TraesCS5B01G100700.1	Wheat	cytosol	60.98	48.08
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	59.76	47.57
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	59.76	47.57
TraesCS5B01G100900.1	Wheat	cytosol	56.1	44.66
TraesCS5B01G100600.1	Wheat	cytosol	56.1	44.23
AT3G21460.1	Thale cress	mitochondrion	54.88	44.12
TraesCS5B01G048300.1	Wheat	cytosol	54.88	43.69
TraesCS5B01G101000.1	Wheat	cytosol	54.88	43.69
Bra001830.1-P	Field mustard	cytosol, plastid	53.66	43.14
Bra001831.1-P	Field mustard	cytosol	53.66	43.14
CDY32430	Canola	cytosol, plastid	53.66	43.14
CDY32431	Canola	cytosol	53.66	43.14
CDY48890	Canola	cytosol, plastid	53.66	43.14
CDY48891	Canola	cytosol	53.66	43.14
VIT_05s0020g01760.t01	Wine grape	cytosol	53.66	43.14
TraesCS5B01G048400.1	Wheat	cytosol	53.66	42.72
TraesCS5B01G048900.1	Wheat	cytosol	53.66	42.72
TraesCS5B01G049100.1	Wheat	cytosol	53.66	42.72
Bra023883.1-P	Field mustard	cytosol, plastid	51.22	41.18
CDY19270	Canola	cytosol, plastid	51.22	41.18
CDY37292	Canola	cytosol, plastid	51.22	41.18
KRH11237	Soybean	cytosol	51.22	41.18
PGSC0003DMT400058325	Potato	cytosol	51.22	41.18
TraesCS5B01G049200.1	Wheat	cytosol	51.22	40.78
VIT_05s0020g01750.t01	Wine grape	cytosol	51.22	40.78
KRG96387	Soybean	cytosol	50.0	40.2
KRH11238	Soybean	cytosol	50.0	40.2
KRH21035	Soybean	cytosol	50.0	40.2
KRH21036	Soybean	cytosol	50.0	40.2
KRH50912	Soybean	cytosol	50.0	40.2
KRH68127	Soybean	cytosol	50.0	40.2
Solyc01g067440.2.1	Tomato	cytosol	50.0	40.2
TraesCS5B01G048600.1	Wheat	cytosol	50.0	39.81
KRH50911	Soybean	cytosol	48.78	39.22
Bra004426.1-P	Field mustard	cytosol	48.78	38.84
CDX80138	Canola	cytosol	48.78	38.84
CDY53023	Canola	cytosol	48.78	38.84
KRH02215	Soybean	cytosol	47.56	38.24
AT2G47870.1	Thale cress	cytosol	47.56	37.86
Bra007717.1-P	Field mustard	cytosol	35.37	37.66
PGSC0003DMT400029525	Potato	cytosol	46.34	37.25
Solyc09g074590.1.1	Tomato	cytosol	46.34	37.25
KRH31918	Soybean	cytosol	45.12	36.27
KRH71537	Soybean	cytosol	45.12	36.27
PGSC0003DMT400029597	Potato	cytosol	45.12	36.27
Solyc09g074600.1.1	Tomato	cytosol	45.12	36.27
TraesCS5B01G049000.1	Wheat	cytosol	37.8	36.05
AT3G62950.1	Thale cress	cytosol	45.12	35.92
Bra014380.1-P	Field mustard	cytosol	45.12	35.92
CDX89161	Canola	cytosol	45.12	35.92
KRG96386	Soybean	cytosol	43.9	35.64
KRH68125	Soybean	cytosol	43.9	35.64
AT4G15700.1	Thale cress	cytosol	43.9	35.29
Bra033503.1-P	Field mustard	cytosol	43.9	35.29
CDY66333	Canola	cytosol	43.9	35.29
CDY68328	Canola	cytosol	43.9	35.29
PGSC0003DMT400013649	Potato	cytosol	43.9	35.29
Solyc06g008750.1.1	Tomato	cytosol	43.9	35.29
VIT_07s0104g01390.t01	Wine grape	plasma membrane	43.9	35.29
VIT_07s0104g01400.t01	Wine grape	cytosol	43.9	35.29
CDX76677	Canola	cytosol	43.9	34.95
CDY11464	Canola	cytosol	43.9	34.95
CDY11465	Canola	cytosol	43.9	34.95
KRH31919	Soybean	cytosol, plasma membrane	42.68	34.65
Solyc06g008760.1.1	Tomato	cytosol	42.68	34.65
AT4G15680.1	Thale cress	cytosol	42.68	34.31
Bra023688.1-P	Field mustard	cytosol	42.68	34.31
Bra033501.1-P	Field mustard	cytosol	42.68	34.31
CDY02610	Canola	cytosol	42.68	34.31
KRH71536	Soybean	extracellular	41.46	33.66
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	54.88	33.58
AT2G30540.1	Thale cress	cytosol	41.46	33.33
AT4G15660.1	Thale cress	cytosol, extracellular	41.46	33.33
AT4G15690.1	Thale cress	cytosol	41.46	33.33
Bra006467.1-P	Field mustard	cytosol	41.46	33.33
Bra038075.1-P	Field mustard	cytosol	41.46	33.33
CDX70828	Canola	cytosol	41.46	33.33
CDX88929	Canola	cytosol	41.46	33.33
CDY09079	Canola	cytosol	41.46	33.33
CDY13904	Canola	cytosol	41.46	33.33
CDY22746	Canola	cytosol	41.46	33.33
PGSC0003DMT400029596	Potato	cytosol	41.46	33.33
Solyc01g067460.1.1	Tomato	cytosol	41.46	33.33
Solyc09g074580.1.1	Tomato	cytosol	41.46	33.33
AT4G15670.1	Thale cress	cytosol	40.24	32.35
AT5G18600.1	Thale cress	cytosol	40.24	32.35
Bra002171.1-P	Field mustard	cytosol	40.24	32.35
Bra012773.1-P	Field mustard	cytosol	40.24	32.35
Bra018307.1-P	Field mustard	cytosol	40.24	32.35
CDX90576	Canola	cytosol	40.24	32.35
CDX92597	Canola	cytosol	40.24	32.35
CDX97824	Canola	cytosol	40.24	32.35
CDY09747	Canola	cytosol	40.24	32.35
CDY10745	Canola	cytosol	40.24	32.35
CDY52638	Canola	cytosol	40.24	32.35
PGSC0003DMT400041381	Potato	cytosol, plastid	40.24	32.35
PGSC0003DMT400058374	Potato	cytosol	40.24	32.35
Bra033504.1-P	Field mustard	cytosol	37.8	32.29
Bra038076.1-P	Field mustard	cytosol, extracellular	39.02	31.68
CDY09078	Canola	cytosol, extracellular	39.02	31.68
CDY22745	Canola	cytosol, extracellular	39.02	31.68
Bra004424.1-P	Field mustard	cytosol	39.02	31.37
Bra021641.1-P	Field mustard	cytosol	39.02	31.37
CDX80139	Canola	cytosol	39.02	31.37
CDY23990	Canola	cytosol	39.02	31.37
CDY29666	Canola	cytosol	39.02	31.37
CDY53024	Canola	cytosol	39.02	31.37
CDY54294	Canola	cytosol	39.02	31.37
CDY66332	Canola	cytosol	39.02	31.37
CDY27469	Canola	cytosol	39.02	30.48
KRH68130	Soybean	cytosol, plastid	39.02	30.48
CDX84825	Canola	cytosol	37.8	30.39
CDX95739	Canola	cytosol	37.8	30.39
CDY54296	Canola	cytosol	37.8	30.39
PGSC0003DMT400041380	Potato	cytosol, plastid	37.8	30.39
Solyc04g011790.1.1	Tomato	cytosol, plastid	37.8	30.39
Bra031540.1-P	Field mustard	cytosol	36.59	30.3
CDY06230	Canola	cytosol	36.59	30.3
CDY09953	Canola	cytosol	36.59	30.3
Solyc06g054570.1.1	Tomato	cytosol	37.8	30.1
Bra033499.1-P	Field mustard	cytosol	35.37	29.59
CDY55528	Canola	cytosol	37.8	29.52
PGSC0003DMT400041379	Potato	cytosol, plastid	34.15	29.47
AT2G47880.1	Thale cress	cytosol	36.59	29.41
AT3G62960.1	Thale cress	cytosol	36.59	29.41
Bra007718.1-P	Field mustard	cytosol	36.59	29.41
CDX76678	Canola	cytosol	36.59	29.41
CDY11466	Canola	cytosol	36.59	29.41
Solyc04g011830.1.1	Tomato	cytosol, plastid	36.59	29.41
Solyc04g011870.1.1	Tomato	cytosol, plastid	36.59	29.41
Solyc04g053110.1.1	Tomato	cytosol	36.59	29.41
CDY10229	Canola	cytosol	35.37	29.29
CDY54881	Canola	cytosol	35.37	29.29
PGSC0003DMT400042706	Potato	cytosol	36.59	29.13
PGSC0003DMT400079099	Potato	cytosol	34.15	28.87
CDY69190	Canola	cytosol	36.59	28.85
PGSC0003DMT400027953	Potato	cytosol, plastid	35.37	28.71
Bra021444.1-P	Field mustard	cytosol	36.59	28.57
Bra003517.1-P	Field mustard	cytosol, extracellular	35.37	28.43
Bra014379.1-P	Field mustard	cytosol	35.37	28.43
CDX89162	Canola	cytosol	35.37	28.43
CDY68061	Canola	cytosol	35.37	28.43
PGSC0003DMT400027946	Potato	cytosol, plastid	35.37	28.43
PGSC0003DMT400041378	Potato	cytosol, plastid	35.37	28.43
PGSC0003DMT400041382	Potato	cytosol	35.37	28.43
PGSC0003DMT400042707	Potato	cytosol	35.37	28.43
Solyc04g011840.1.1	Tomato	cytosol	35.37	28.43
Solyc04g011850.1.1	Tomato	cytosol	35.37	28.43
Solyc09g074570.1.1	Tomato	cytosol	36.59	28.3
AT1G06830.1	Thale cress	cytosol	34.15	28.28
KRG96390	Soybean	cytosol, plastid	35.37	27.62
Bra014382.1-P	Field mustard	cytosol	34.15	27.45
CDX89159	Canola	cytosol	34.15	27.45
CDX93949	Canola	cytosol	34.15	27.45
PGSC0003DMT400027947	Potato	cytosol, plastid	34.15	27.45
PGSC0003DMT400027948	Potato	cytosol, plastid	34.15	27.45
PGSC0003DMT400027950	Potato	cytosol, plastid	34.15	27.45
PGSC0003DMT400027951	Potato	cytosol, plastid	34.15	27.45
PGSC0003DMT400027954	Potato	cytosol, plastid	34.15	27.45
Solyc04g011810.1.1	Tomato	cytosol, plastid	34.15	27.45
Solyc04g011860.1.1	Tomato	cytosol, plastid	34.15	27.45
Solyc04g011880.1.1	Tomato	cytosol, plastid	34.15	27.45
Solyc04g011820.1.1	Tomato	cytosol	31.71	27.37
VIT_07s0104g01420.t01	Wine grape	cytosol	35.37	27.36
Solyc05g051730.1.1	Tomato	cytosol	34.15	27.18
TraesCS2B01G271600.1	Wheat	cytosol	45.12	27.01
AT3G62930.1	Thale cress	cytosol	32.93	26.47
Bra003515.1-P	Field mustard	cytosol	32.93	26.47
Bra007714.1-P	Field mustard	cytosol	32.93	26.47
Bra032563.1-P	Field mustard	cytosol	32.93	26.47
Bra033366.1-P	Field mustard	cytosol	32.93	26.47
CDX67910	Canola	cytosol	32.93	26.47
CDX76675	Canola	cytosol	32.93	26.47
CDX89921	Canola	cytosol	32.93	26.47
CDY11462	Canola	cytosol	32.93	26.47
CDY18141	Canola	cytosol	32.93	26.47
CDY25124	Canola	cytosol	32.93	26.47
CDY32493	Canola	cytosol	32.93	26.47
KRG96389	Soybean	cytosol	32.93	26.47
KRH31917	Soybean	cytosol	32.93	26.47
KRH68129	Soybean	cytosol	32.93	26.47
PGSC0003DMT400027949	Potato	cytosol, plastid	32.93	26.47
Solyc04g011780.1.1	Tomato	extracellular	32.93	26.47
Solyc04g011800.1.1	Tomato	cytosol, plastid	32.93	26.47
PGSC0003DMT400027952	Potato	cytosol	30.49	26.32
PGSC0003DMT400077393	Potato	cytosol	32.93	26.21
PGSC0003DMT400077394	Potato	cytosol	32.93	25.96
Solyc05g051720.1.1	Tomato	cytosol	32.93	25.96
AT1G03020.1	Thale cress	cytosol	31.71	25.49
KRH71538	Soybean	cytosol	31.71	25.49
PGSC0003DMT400029673	Potato	cytosol	32.93	25.47
KRH31916	Soybean	cytosol	29.27	25.26
KRH31915	Soybean	cytosol, plastid	31.71	24.76
Bra015532.1-P	Field mustard	cytosol	31.71	17.93
CDX97821	Canola	mitochondrion	28.05	17.29
CDY71728	Canola	cytosol	29.27	16.9
PGSC0003DMT400013650	Potato	cytosol	37.8	10.51

Protein Annotations

EnsemblPlants:TraesCS3B01G506000.1	EnsemblPlantsGene:TraesCS3B01G506000	Gene3D:3.40.30.10	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF62
SUPFAM:SSF52833	MapMan:18.8.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:749728469..749728717

Molecular Weight (calculated)

8929.2 Da

IEP (calculated)

10.782

GRAVY (calculated)

0.418

Length

82 amino acids

Sequence
(BLAST)

1: MADRVKKLAS QRAVVIFGVS NRFMCHTVKT LFTELGVSWA VHKLAKDPWG KDVERALAGM VMTLHLGGQL VPLLSQAGAL LL

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.