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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68863
CDX75256
CDX83601
CDX86457
CDX95752
CDY23332
CDY30950
CDY51673
CDY58518

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 CDX95752 AT2G29310.1 21798944
AT2G30540.1 CDX86457 AT3G27960.1 21798944
AT2G30540.1 CDY58518 AT3G27960.1 21798944
AT2G30540.1 CDX68863 AT4G32570.1 21798944
AT2G30540.1 CDX75256 AT4G32570.1 21798944
AT2G30540.1 CDX83601 AT4G32570.1 21798944
AT2G30540.1 CDY23332 AT4G32570.1 21798944
AT2G30540.1 CDY30950 AT4G32570.1 21798944
AT2G30540.1 CDY51673 AT4G32570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97824 Canola cytosol 53.52 74.51
CDY23990 Canola cytosol 53.52 74.51
CDY29666 Canola cytosol 53.52 74.51
CDY52638 Canola cytosol 53.52 74.51
AT2G30540.1 Thale cress cytosol 52.82 73.53
CDX84825 Canola cytosol 52.82 73.53
CDY10745 Canola cytosol 52.82 73.53
CDY54881 Canola cytosol 49.3 70.71
CDY06230 Canola cytosol 47.89 68.69
CDY09953 Canola cytosol 47.89 68.69
CDY10229 Canola cytosol 47.89 68.69
CDX80139 Canola cytosol 45.07 62.75
CDY53024 Canola cytosol 45.07 62.75
VIT_07s0104g01390.t01 Wine grape plasma membrane 45.07 62.75
CDY11466 Canola cytosol 44.37 61.76
CDY27469 Canola cytosol 45.07 60.95
CDY55528 Canola cytosol 45.07 60.95
CDX76678 Canola cytosol 43.66 60.78
CDX89162 Canola cytosol 43.66 60.78
CDX95739 Canola cytosol 43.66 60.78
CDY68061 Canola cytosol 43.66 60.78
KRG96386 Soybean cytosol 42.25 59.41
KRH31919 Soybean cytosol, plasma membrane 42.25 59.41
KRH68125 Soybean cytosol 41.55 58.42
KRH71536 Soybean extracellular 40.14 56.44
Solyc06g008760.1.1 Tomato cytosol 37.32 52.48
PGSC0003DMT400029673 Potato cytosol 36.62 49.06
Solyc09g074570.1.1 Tomato cytosol 36.62 49.06
GSMUA_Achr11P... Banana cytosol, extracellular 34.51 47.57
TraesCS5B01G100900.1 Wheat cytosol 34.51 47.57
GSMUA_Achr11P... Banana cytosol 33.8 46.6
Os01t0368900-01 Rice cytosol 33.8 46.6
TraesCS5A01G094700.1 Wheat cytosol 33.8 46.6
TraesCS5D01G107200.1 Wheat cytosol 33.8 46.6
Zm00001d040837_P001 Maize cytosol 33.8 46.6
Zm00001d027695_P001 Maize cytosol 33.8 46.15
EES00746 Sorghum cytosol 33.1 45.63
GSMUA_Achr5P00380_001 Banana extracellular 33.1 45.63
HORVU5Hr1G025680.1 Barley cytosol 33.1 45.63
CDY54294 Canola cytosol 32.39 45.1
CDY66333 Canola cytosol 32.39 45.1
GSMUA_Achr1P26720_001 Banana cytosol 32.39 44.66
GSMUA_Achr8P33660_001 Banana cytosol 32.39 44.66
TraesCS5B01G101100.1 Wheat cytosol, extracellular 32.39 44.66
TraesCS5D01G107500.1 Wheat cytosol, extracellular 32.39 44.66
HORVU3Hr1G099150.1 Barley cytosol, extracellular 20.42 44.62
TraesCS5A01G094500.1 Wheat cytosol 32.39 44.23
TraesCS5B01G100600.1 Wheat cytosol 32.39 44.23
TraesCS5D01G106800.1 Wheat cytosol 32.39 44.23
CDX92597 Canola cytosol 31.69 44.12
CDY13904 Canola cytosol 31.69 44.12
CDY54296 Canola cytosol 31.69 44.12
CDY66332 Canola cytosol 31.69 44.12
HORVU5Hr1G033140.1 Barley cytosol 32.39 43.81
Os12t0538600-00 Rice cytosol, extracellular 31.69 43.69
TraesCS5A01G094900.1 Wheat extracellular 31.69 43.69
TraesCS5B01G101000.1 Wheat cytosol 31.69 43.69
TraesCS5B01G101600.1 Wheat cytosol, extracellular 31.69 43.69
TraesCS5D01G054000.1 Wheat cytosol 31.69 43.69
TraesCS5D01G054200.1 Wheat cytosol 31.69 43.69
TraesCS5D01G107300.1 Wheat cytosol 31.69 43.69
TraesCS5D01G108100.1 Wheat cytosol, extracellular 31.69 43.69
Zm00001d040836_P001 Maize cytosol 31.69 43.69
CDY69190 Canola cytosol 31.69 43.27
CDX70828 Canola cytosol 30.99 43.14
CDX90576 Canola cytosol 30.99 43.14
CDY02610 Canola cytosol 30.99 43.14
CDY09747 Canola cytosol 30.99 43.14
CDY19270 Canola cytosol, plastid 30.99 43.14
CDY22746 Canola cytosol 30.99 43.14
CDY32430 Canola cytosol, plastid 30.99 43.14
CDY32431 Canola cytosol 30.99 43.14
CDY37292 Canola cytosol, plastid 30.99 43.14
CDY48891 Canola cytosol 30.99 43.14
CDY68328 Canola cytosol 30.99 43.14
TraesCS5B01G049000.1 Wheat cytosol 26.06 43.02
EES00745 Sorghum cytosol 30.99 42.72
GSMUA_AchrUn_... Banana cytosol, extracellular 30.99 42.72
HORVU5Hr1G025710.1 Barley cytosol, extracellular 30.99 42.72
TraesCS5A01G044100.1 Wheat cytosol 30.99 42.72
TraesCS5A01G044900.1 Wheat cytosol 30.99 42.72
TraesCS5A01G094800.1 Wheat cytosol 30.99 42.72
TraesCS5A01G095500.1 Wheat cytosol 30.99 42.72
TraesCS5B01G048300.1 Wheat cytosol 30.99 42.72
TraesCS5B01G048400.1 Wheat cytosol 30.99 42.72
TraesCS5D01G054900.1 Wheat cytosol 30.99 42.72
CDY09078 Canola cytosol, extracellular 30.28 42.57
CDY22745 Canola cytosol, extracellular 30.28 42.57
CDX88929 Canola cytosol 30.28 42.16
CDY48890 Canola cytosol, plastid 30.28 42.16
EES02025 Sorghum cytosol 31.69 42.06
HORVU5Hr1G025690.1 Barley cytosol 33.1 41.96
Zm00001d023872_P001 Maize cytosol, mitochondrion 30.99 41.9
GSMUA_Achr11P... Banana cytosol, extracellular 30.28 41.75
GSMUA_Achr5P00370_001 Banana cytosol 30.28 41.75
HORVU5Hr1G010870.1 Barley cytosol 30.28 41.75
HORVU5Hr1G010960.1 Barley cytosol 30.28 41.75
TraesCS5A01G044700.1 Wheat cytosol 30.28 41.75
TraesCS5A01G045000.1 Wheat cytosol 30.28 41.75
TraesCS5B01G048600.1 Wheat cytosol 30.28 41.75
TraesCS5B01G048900.1 Wheat cytosol 30.28 41.75
TraesCS5B01G049100.1 Wheat cytosol 30.28 41.75
TraesCS5B01G049200.1 Wheat cytosol 30.28 41.75
TraesCS5D01G054800.1 Wheat cytosol 30.28 41.75
TraesCS5D01G055000.1 Wheat cytosol 30.28 41.75
HORVU5Hr1G025610.1 Barley cytosol 30.28 41.35
Os12t0538700-01 Rice cytosol 30.28 41.35
TraesCS5A01G094600.1 Wheat cytosol 30.28 41.35
Zm00001d023869_P001 Maize cytosol 30.28 41.35
GSMUA_Achr7P03690_001 Banana cytosol 29.58 40.78
GSMUA_Achr8P09970_001 Banana cytosol 29.58 40.78
TraesCS5A01G044400.1 Wheat cytosol 29.58 40.78
TraesCS5A01G044800.1 Wheat cytosol 29.58 40.78
TraesCS5D01G054400.1 Wheat cytosol 29.58 40.78
TraesCS5D01G055100.1 Wheat cytosol 29.58 40.78
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 29.58 40.38
TraesCS3A01G462200.1 Wheat cytosol 29.58 40.38
TraesCS3B01G504700.1 Wheat cytosol 29.58 40.38
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 29.58 40.38
TraesCS5B01G100700.1 Wheat cytosol 29.58 40.38
TraesCS5D01G106900.1 Wheat cytosol 29.58 40.38
Zm00001d023870_P001 Maize cytosol, extracellular 29.58 40.38
Zm00001d023873_P001 Maize cytosol 29.58 40.38
CDY09079 Canola cytosol 28.87 40.2
EES16093 Sorghum cytosol 29.58 40.0
CDX80138 Canola cytosol 28.87 39.81
CDX89161 Canola cytosol 28.87 39.81
EES17138 Sorghum cytosol 29.58 39.62
EES16092 Sorghum cytosol 28.87 39.05
CDY53023 Canola cytosol 28.17 38.84
HORVU5Hr1G010950.1 Barley cytosol 28.17 38.84
Zm00001d042187_P001 Maize cytosol 30.28 38.74
TraesCS3A01G463000.1 Wheat cytosol 28.17 38.46
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 28.17 38.46
TraesCS3D01G456900.1 Wheat cytosol 28.17 38.46
CDX89159 Canola cytosol 27.46 38.24
CDX93949 Canola cytosol 27.46 38.24
CDY18141 Canola cytosol 27.46 38.24
CDY32493 Canola cytosol 27.46 38.24
CDX76677 Canola cytosol 27.46 37.86
CDY11464 Canola cytosol 27.46 37.86
CDY11465 Canola cytosol 27.46 37.86
Os11t0656000-00 Rice cytosol, plastid 28.87 37.61
HORVU3Hr1G099090.1 Barley cytosol 27.46 37.5
TraesCS3A01G463200.1 Wheat cytosol 27.46 37.5
TraesCS3B01G505300.1 Wheat cytosol 27.46 37.5
TraesCS3B01G506200.1 Wheat cytosol 27.46 37.5
TraesCS3B01G506500.1 Wheat cytosol 27.46 37.5
TraesCS4D01G147300.1 Wheat cytosol 27.46 37.5
CDX76675 Canola cytosol 26.76 37.25
CDX89921 Canola cytosol 26.76 37.25
CDY11462 Canola cytosol 26.76 37.25
HORVU3Hr1G099050.2 Barley cytosol 28.17 37.04
TraesCS3A01G462900.1 Wheat cytosol, extracellular 26.76 36.54
TraesCS3B01G506400.1 Wheat cytosol 26.76 36.54
TraesCS3D01G457200.1 Wheat cytosol 26.76 36.54
OQU79243 Sorghum cytosol 27.46 36.45
EES16096 Sorghum cytosol 26.76 36.19
Os11t0655900-01 Rice extracellular 27.46 36.11
Zm00001d048720_P001 Maize cytosol 28.17 36.04
Os11t0656400-00 Rice cytosol, plastid 27.46 35.78
EES16097 Sorghum cytosol 26.76 35.51
Os05t0149950-00 Rice cytosol, mitochondrion 28.17 35.09
Os11t0656700-00 Rice cytosol, plastid 26.76 34.86
Zm00001d048719_P001 Maize cytosol 26.76 34.55
CDX67910 Canola cytosol 24.65 34.31
CDY25124 Canola cytosol 24.65 34.31
EES08918 Sorghum cytosol, plastid 25.35 34.29
CDX97821 Canola mitochondrion 31.69 33.83
HORVU5Hr1G025560.1 Barley cytosol 32.39 33.82
Os01t0936000-00 Rice cytosol 29.58 33.6
EES08919 Sorghum cytosol 25.35 33.03
TraesCS3A01G462800.1 Wheat extracellular 17.61 30.49
TraesCS3B01G506000.1 Wheat mitochondrion 16.9 29.27
CDX70540 Canola cytosol 28.17 29.2
CDX85614 Canola cytosol 28.17 29.2
CDX78558 Canola cytosol 27.46 28.47
CDX91084 Canola cytosol 27.46 28.47
CDX74327 Canola cytosol 26.76 27.74
CDX91918 Canola cytosol 26.06 27.61
HORVU0Hr1G010190.2 Barley cytosol 16.9 22.86
CDY58422 Canola cytosol 26.06 22.02
CDX69609 Canola cytosol 15.49 21.78
PGSC0003DMT400013650 Potato cytosol 38.03 18.31
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:A0A078JVW9UniProt:A0A078JVW9EnsemblPlants:CDY71728ProteinID:CDY71728
ProteinID:CDY71728.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091
GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725
GO:GO:0022900GO:GO:0045454GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00019686001InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:IPR002109PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF57SUPFAM:SSF52833
TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0004EE93F9SEG:seg::
Description
BnaC04g56450DBnaC04g56450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVW9]
Coordinates
chrLK047148:-:1141..1653
Molecular Weight (calculated)
15470.3 Da
IEP (calculated)
4.746
GRAVY (calculated)
-0.246
Length
142 amino acids
Sequence
(BLAST)
001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPDCR EIEKALMRLG CSTPVPAVFV GGKLVALQEN TPNSDGGSDG LQCRRTFVTD
101: CRPISDENQK FEVVGIPSTI SDGIPTKNGS SEFSDDFSTT FR
Best Arabidopsis Sequence Match ( AT2G30540.1 )
(BLAST)
001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPECR EIEKALMRLG CSTPVPAIFV GGKLIGSTNE VMSLHLSGSL VPLVKPFQAN
101: LC
Arabidopsis Description
GRXS9Monothiol glutaredoxin-S9 [Source:UniProtKB/Swiss-Prot;Acc:O04341]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.