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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G001860.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU6Hr1G069310.1
HORVU6Hr1G093960.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 HORVU6Hr1G069310.1 AT3G27960.1 21798944
AT4G15700.1 HORVU0Hr1G018470.1 AT1G22920.1 21798944
AT4G15700.1 HORVU0Hr1G025410.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G008160.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G056160.5 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G067660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G112000.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G021300.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G054660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G113750.1 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G047410.2 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G048730.1 AT1G22920.1 21798944
AT4G15700.1 HORVU6Hr1G023630.1 AT1G22920.1 21798944
AT4G15700.1 HORVU7Hr1G078010.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05230.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05250.1 21798944
AT4G15700.1 HORVU6Hr1G093960.1 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G054400.1 Wheat cytosol 93.2 93.2
TraesCS5B01G048600.1 Wheat cytosol 92.23 92.23
TraesCS5D01G054000.1 Wheat cytosol 92.23 92.23
TraesCS5B01G048300.1 Wheat cytosol 91.26 91.26
TraesCS5A01G044100.1 Wheat cytosol 90.29 90.29
TraesCS5A01G044400.1 Wheat cytosol 90.29 90.29
HORVU5Hr1G010950.1 Barley cytosol 89.32 89.32
HORVU5Hr1G010960.1 Barley cytosol 87.38 87.38
Os01t0368900-01 Rice cytosol 82.52 82.52
Zm00001d040837_P001 Maize cytosol 82.52 82.52
EES00746 Sorghum cytosol 79.61 79.61
Zm00001d027695_P001 Maize cytosol 77.67 76.92
EES00745 Sorghum cytosol 75.73 75.73
Zm00001d040836_P001 Maize cytosol 75.73 75.73
HORVU5Hr1G025710.1 Barley cytosol, extracellular 66.02 66.02
HORVU5Hr1G025610.1 Barley cytosol 66.02 65.38
HORVU5Hr1G025680.1 Barley cytosol 65.05 65.05
HORVU3Hr1G099090.1 Barley cytosol 62.14 61.54
HORVU3Hr1G099050.2 Barley cytosol 63.11 60.19
Bra002171.1-P Field mustard cytosol 59.22 59.8
CDX92597 Canola cytosol 59.22 59.8
HORVU5Hr1G033140.1 Barley cytosol 60.19 59.05
Bra006467.1-P Field mustard cytosol 58.25 58.82
Bra023688.1-P Field mustard cytosol 58.25 58.82
CDX70828 Canola cytosol 58.25 58.82
CDX88929 Canola cytosol 58.25 58.82
CDY13904 Canola cytosol 58.25 58.82
VIT_05s0020g01750.t01 Wine grape cytosol 58.25 58.25
HORVU5Hr1G025690.1 Barley cytosol 63.11 58.04
CDY02610 Canola cytosol 57.28 57.84
CDY68328 Canola cytosol 57.28 57.84
KRH11237 Soybean cytosol 57.28 57.84
HORVU3Hr1G099150.1 Barley cytosol, extracellular 35.92 56.92
KRG96386 Soybean cytosol 55.34 56.44
KRH68125 Soybean cytosol 55.34 56.44
Os05t0149950-00 Rice cytosol, mitochondrion 62.14 56.14
AT5G18600.1 Thale cress cytosol 55.34 55.88
KRH02215 Soybean cytosol 55.34 55.88
KRH21036 Soybean cytosol 55.34 55.88
PGSC0003DMT400058374 Potato cytosol 55.34 55.88
VIT_07s0104g01390.t01 Wine grape plasma membrane 55.34 55.88
KRH71536 Soybean extracellular 54.37 55.45
KRH11238 Soybean cytosol 54.37 54.9
KRH21035 Soybean cytosol 54.37 54.9
KRH50911 Soybean cytosol 54.37 54.9
PGSC0003DMT400029525 Potato cytosol 54.37 54.9
Solyc01g067460.1.1 Tomato cytosol 54.37 54.9
Solyc09g074590.1.1 Tomato cytosol 54.37 54.9
VIT_05s0020g01760.t01 Wine grape cytosol 54.37 54.9
KRH31919 Soybean cytosol, plasma membrane 53.4 54.46
AT4G15700.1 Thale cress cytosol 53.4 53.92
KRH50912 Soybean cytosol 53.4 53.92
KRH68129 Soybean cytosol 53.4 53.92
PGSC0003DMT400029597 Potato cytosol 53.4 53.92
Solyc09g074600.1.1 Tomato cytosol 53.4 53.92
PGSC0003DMT400041379 Potato cytosol, plastid 49.51 53.68
PGSC0003DMT400042706 Potato cytosol 53.4 53.4
KRG96389 Soybean cytosol 52.43 52.94
PGSC0003DMT400027946 Potato cytosol, plastid 52.43 52.94
Solyc01g067440.2.1 Tomato cytosol 52.43 52.94
Solyc04g011790.1.1 Tomato cytosol, plastid 52.43 52.94
Solyc04g011870.1.1 Tomato cytosol, plastid 52.43 52.94
AT2G30540.1 Thale cress cytosol 51.46 51.96
AT3G21460.1 Thale cress mitochondrion 51.46 51.96
AT4G15660.1 Thale cress cytosol, extracellular 51.46 51.96
Bra032563.1-P Field mustard cytosol 51.46 51.96
Bra033503.1-P Field mustard cytosol 51.46 51.96
CDY32493 Canola cytosol 51.46 51.96
CDY66333 Canola cytosol 51.46 51.96
PGSC0003DMT400027950 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400041378 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400041380 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400041381 Potato cytosol, plastid 51.46 51.96
PGSC0003DMT400041382 Potato cytosol 51.46 51.96
PGSC0003DMT400058325 Potato cytosol 51.46 51.96
Solyc04g011830.1.1 Tomato cytosol, plastid 51.46 51.96
PGSC0003DMT400027952 Potato cytosol 47.57 51.58
Solyc04g011820.1.1 Tomato cytosol 47.57 51.58
Bra031540.1-P Field mustard cytosol 49.51 51.52
CDY06230 Canola cytosol 49.51 51.52
CDY09953 Canola cytosol 49.51 51.52
PGSC0003DMT400027953 Potato cytosol, plastid 50.49 51.49
Bra004426.1-P Field mustard cytosol 51.46 51.46
CDX80138 Canola cytosol 51.46 51.46
AT4G15670.1 Thale cress cytosol 50.49 50.98
AT4G15680.1 Thale cress cytosol 50.49 50.98
AT4G15690.1 Thale cress cytosol 50.49 50.98
Bra001830.1-P Field mustard cytosol, plastid 50.49 50.98
Bra033366.1-P Field mustard cytosol 50.49 50.98
Bra033501.1-P Field mustard cytosol 50.49 50.98
CDX89921 Canola cytosol 50.49 50.98
CDX97824 Canola cytosol 50.49 50.98
CDY18141 Canola cytosol 50.49 50.98
CDY32430 Canola cytosol, plastid 50.49 50.98
CDY48890 Canola cytosol, plastid 50.49 50.98
KRG96387 Soybean cytosol 50.49 50.98
KRH68127 Soybean cytosol 50.49 50.98
PGSC0003DMT400013649 Potato cytosol 50.49 50.98
Solyc04g011840.1.1 Tomato cytosol 50.49 50.98
Solyc04g011850.1.1 Tomato cytosol 50.49 50.98
Solyc04g011860.1.1 Tomato cytosol, plastid 50.49 50.98
Bra007717.1-P Field mustard cytosol 37.86 50.65
AT1G06830.1 Thale cress cytosol 48.54 50.51
Bra038076.1-P Field mustard cytosol, extracellular 49.51 50.49
CDY09078 Canola cytosol, extracellular 49.51 50.49
CDY22745 Canola cytosol, extracellular 49.51 50.49
Solyc06g008760.1.1 Tomato cytosol 49.51 50.49
CDY53023 Canola cytosol 50.49 50.49
AT1G03020.1 Thale cress cytosol 49.51 50.0
AT2G47880.1 Thale cress cytosol 49.51 50.0
AT3G62960.1 Thale cress cytosol 49.51 50.0
Bra001831.1-P Field mustard cytosol 49.51 50.0
Bra004424.1-P Field mustard cytosol 49.51 50.0
Bra012773.1-P Field mustard cytosol 49.51 50.0
Bra018307.1-P Field mustard cytosol 49.51 50.0
Bra021641.1-P Field mustard cytosol 49.51 50.0
CDX80139 Canola cytosol 49.51 50.0
CDX90576 Canola cytosol 49.51 50.0
CDY09747 Canola cytosol 49.51 50.0
CDY10745 Canola cytosol 49.51 50.0
CDY22746 Canola cytosol 49.51 50.0
CDY23990 Canola cytosol 49.51 50.0
CDY29666 Canola cytosol 49.51 50.0
CDY32431 Canola cytosol 49.51 50.0
CDY48891 Canola cytosol 49.51 50.0
CDY52638 Canola cytosol 49.51 50.0
CDY53024 Canola cytosol 49.51 50.0
CDY54294 Canola cytosol 49.51 50.0
KRH31917 Soybean cytosol 49.51 50.0
PGSC0003DMT400027947 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027948 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027949 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027951 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027954 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400029596 Potato cytosol 49.51 50.0
Solyc04g011810.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g011880.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g053110.1.1 Tomato cytosol 49.51 50.0
Solyc06g008750.1.1 Tomato cytosol 49.51 50.0
Solyc09g074580.1.1 Tomato cytosol 49.51 50.0
AT2G47870.1 Thale cress cytosol 49.51 49.51
AT3G62950.1 Thale cress cytosol 49.51 49.51
Bra014380.1-P Field mustard cytosol 49.51 49.51
CDX89161 Canola cytosol 49.51 49.51
PGSC0003DMT400077393 Potato cytosol 49.51 49.51
CDY10229 Canola cytosol 47.57 49.49
CDY54881 Canola cytosol 47.57 49.49
PGSC0003DMT400077394 Potato cytosol 49.51 49.04
Solyc05g051720.1.1 Tomato cytosol 49.51 49.04
Bra003517.1-P Field mustard cytosol, extracellular 48.54 49.02
Bra007718.1-P Field mustard cytosol 48.54 49.02
Bra014379.1-P Field mustard cytosol 48.54 49.02
Bra014382.1-P Field mustard cytosol 48.54 49.02
Bra023883.1-P Field mustard cytosol, plastid 48.54 49.02
Bra038075.1-P Field mustard cytosol 48.54 49.02
CDX76678 Canola cytosol 48.54 49.02
CDX84825 Canola cytosol 48.54 49.02
CDX89159 Canola cytosol 48.54 49.02
CDX89162 Canola cytosol 48.54 49.02
CDX93949 Canola cytosol 48.54 49.02
CDY11466 Canola cytosol 48.54 49.02
CDY19270 Canola cytosol, plastid 48.54 49.02
CDY37292 Canola cytosol, plastid 48.54 49.02
CDY68061 Canola cytosol 48.54 49.02
KRH31918 Soybean cytosol 48.54 49.02
KRH71537 Soybean cytosol 48.54 49.02
KRH71538 Soybean cytosol 48.54 49.02
PGSC0003DMT400042707 Potato cytosol 48.54 49.02
Solyc04g011780.1.1 Tomato extracellular 48.54 49.02
Solyc04g011800.1.1 Tomato cytosol, plastid 48.54 49.02
Bra033499.1-P Field mustard cytosol 46.6 48.98
Bra033504.1-P Field mustard cytosol 45.63 48.96
CDY27469 Canola cytosol 49.51 48.57
CDX76677 Canola cytosol 48.54 48.54
CDY11464 Canola cytosol 48.54 48.54
CDY11465 Canola cytosol 48.54 48.54
CDY69190 Canola cytosol 48.54 48.08
Bra007714.1-P Field mustard cytosol 47.57 48.04
CDX76675 Canola cytosol 47.57 48.04
CDX95739 Canola cytosol 47.57 48.04
CDY09079 Canola cytosol 47.57 48.04
CDY11462 Canola cytosol 47.57 48.04
CDY54296 Canola cytosol 47.57 48.04
CDY66332 Canola cytosol 47.57 48.04
VIT_07s0104g01400.t01 Wine grape cytosol 47.57 48.04
Solyc05g051730.1.1 Tomato cytosol 47.57 47.57
PGSC0003DMT400079099 Potato cytosol 44.66 47.42
VIT_07s0104g01420.t01 Wine grape cytosol 48.54 47.17
CDY55528 Canola cytosol 47.57 46.67
Solyc06g054570.1.1 Tomato cytosol 46.6 46.6
AT3G62930.1 Thale cress cytosol 45.63 46.08
Bra003515.1-P Field mustard cytosol 45.63 46.08
CDX67910 Canola cytosol 45.63 46.08
CDY25124 Canola cytosol 45.63 46.08
Bra021444.1-P Field mustard cytosol 46.6 45.71
HORVU5Hr1G025560.1 Barley cytosol 60.19 45.59
Solyc09g074570.1.1 Tomato cytosol 46.6 45.28
HORVU0Hr1G003840.1 Barley extracellular 57.28 44.03
KRG96390 Soybean cytosol, plastid 44.66 43.81
KRH68130 Soybean cytosol, plastid 44.66 43.81
PGSC0003DMT400029673 Potato cytosol 44.66 43.4
KRH31916 Soybean cytosol 39.81 43.16
HORVU0Hr1G010190.2 Barley cytosol 42.72 41.9
KRH31915 Soybean cytosol, plastid 40.78 40.0
Bra015532.1-P Field mustard cytosol 43.69 31.03
CDY71728 Canola cytosol 41.75 30.28
CDX97821 Canola mitochondrion 35.92 27.82
HORVU2Hr1G060300.1 Barley cytosol 41.75 24.57
PGSC0003DMT400013650 Potato cytosol 41.75 14.58
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
EnsemblPlantsGene:HORVU5Hr1G010870EnsemblPlants:HORVU5Hr1G010870.1InterPro:IPR002109UniProt:M0VDB3PFAM:PF00462PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF92SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI00029683D3
Description
No Description!
Coordinates
chrchr5H:+:28159291..28161899
Molecular Weight (calculated)
11085.9 Da
IEP (calculated)
9.654
GRAVY (calculated)
0.315
Length
103 amino acids
Sequence
(BLAST)
001: MEQVTRLAAQ RAVVIFGMSS CCMCHTVTSL LRDLGANPTV VKLDEDPRGK EMEKALVRLL GRNPAVPAVF IGGRLAGCTD KIMSLHLSGK LVPLLRNAGA
101: VWL
Best Arabidopsis Sequence Match ( AT3G62950.1 )
(BLAST)
001: MERIRDLSSK KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPEGR EMERALRALG SSNPAVPAVF VGGRYIGSAK DIISFHVDGS LKQMLKDAKA
101: IWL
Arabidopsis Description
GRXC11Glutaredoxin-C11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.