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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68229
CDX68863
CDX72984
CDX75256
CDX83601
CDX93081
CDX96471
CDY04768
CDY11109
CDY15046
CDY21400
CDY23332
CDY25761
CDY30950
CDY44770
CDY51673

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15700.1 CDY04768 AT1G22920.1 21798944
AT4G15700.1 CDY21400 AT1G22920.1 21798944
AT4G15700.1 CDY25761 AT1G22920.1 21798944
AT4G15700.1 CDX68229 AT1G73360.1 21798944
AT4G15700.1 CDX72984 AT1G73360.1 21798944
AT4G15700.1 CDX96471 AT1G73360.1 21798944
AT4G15700.1 CDY11109 AT1G73360.1 21798944
AT4G15700.1 CDX93081 AT2G05230.1 21798944
AT4G15700.1 CDY15046 AT2G05230.1 21798944
AT4G15700.1 CDX93081 AT2G05250.1 21798944
AT4G15700.1 CDY15046 AT2G05250.1 21798944
AT4G15700.1 CDX68863 AT4G32570.1 21798944
AT4G15700.1 CDX75256 AT4G32570.1 21798944
AT4G15700.1 CDX83601 AT4G32570.1 21798944
AT4G15700.1 CDY23332 AT4G32570.1 21798944
AT4G15700.1 CDY30950 AT4G32570.1 21798944
AT4G15700.1 CDY51673 AT4G32570.1 21798944
AT4G15700.1 CDY44770 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033503.1-P Field mustard cytosol 100.0 100.0
AT4G15690.1 Thale cress cytosol 94.12 94.12
AT4G15700.1 Thale cress cytosol 93.14 93.14
CDY22746 Canola cytosol 93.14 93.14
AT4G15670.1 Thale cress cytosol 92.16 92.16
CDX90576 Canola cytosol 92.16 92.16
CDY09747 Canola cytosol 92.16 92.16
CDY54294 Canola cytosol 92.16 92.16
AT4G15660.1 Thale cress cytosol, extracellular 91.18 91.18
CDY09078 Canola cytosol, extracellular 89.22 90.1
CDY22745 Canola cytosol, extracellular 89.22 90.1
CDY09079 Canola cytosol 89.22 89.22
CDY69190 Canola cytosol 90.2 88.46
CDY66332 Canola cytosol 88.24 88.24
CDY54296 Canola cytosol 87.25 87.25
KRH11237 Soybean cytosol 74.51 74.51
KRH21036 Soybean cytosol 74.51 74.51
Solyc01g067460.1.1 Tomato cytosol 72.55 72.55
CDX70828 Canola cytosol 71.57 71.57
PGSC0003DMT400058374 Potato cytosol 71.57 71.57
VIT_05s0020g01750.t01 Wine grape cytosol 71.57 70.87
CDX88929 Canola cytosol 70.59 70.59
CDX92597 Canola cytosol 70.59 70.59
CDY02610 Canola cytosol 70.59 70.59
CDY13904 Canola cytosol 70.59 70.59
CDY68328 Canola cytosol 68.63 68.63
Solyc06g054570.1.1 Tomato cytosol 66.67 66.02
PGSC0003DMT400079099 Potato cytosol 60.78 63.92
CDY32430 Canola cytosol, plastid 61.76 61.76
CDY32431 Canola cytosol 61.76 61.76
CDY48891 Canola cytosol 61.76 61.76
Os12t0538600-00 Rice cytosol, extracellular 61.76 61.16
TraesCS5A01G094700.1 Wheat cytosol 61.76 61.16
TraesCS5A01G094900.1 Wheat extracellular 61.76 61.16
TraesCS5A01G095500.1 Wheat cytosol 61.76 61.16
TraesCS5B01G100900.1 Wheat cytosol 61.76 61.16
TraesCS5B01G101100.1 Wheat cytosol, extracellular 61.76 61.16
TraesCS5B01G101600.1 Wheat cytosol, extracellular 61.76 61.16
TraesCS5D01G107200.1 Wheat cytosol 61.76 61.16
TraesCS5D01G108100.1 Wheat cytosol, extracellular 61.76 61.16
CDY18141 Canola cytosol 60.78 60.78
CDY32493 Canola cytosol 60.78 60.78
GSMUA_Achr11P... Banana cytosol, extracellular 60.78 60.19
GSMUA_Achr5P00380_001 Banana extracellular 60.78 60.19
HORVU5Hr1G025710.1 Barley cytosol, extracellular 60.78 60.19
TraesCS5D01G107500.1 Wheat cytosol, extracellular 60.78 60.19
Zm00001d040837_P001 Maize cytosol 60.78 60.19
CDY48890 Canola cytosol, plastid 59.8 59.8
TraesCS5A01G094600.1 Wheat cytosol 60.78 59.62
TraesCS5B01G100700.1 Wheat cytosol 60.78 59.62
HORVU5Hr1G025680.1 Barley cytosol 59.8 59.22
CDX89921 Canola cytosol 58.82 58.82
CDY19270 Canola cytosol, plastid 58.82 58.82
CDY37292 Canola cytosol, plastid 58.82 58.82
HORVU5Hr1G025610.1 Barley cytosol 59.8 58.65
TraesCS5D01G106900.1 Wheat cytosol 59.8 58.65
EES00746 Sorghum cytosol 58.82 58.25
GSMUA_Achr11P... Banana cytosol 58.82 58.25
Os01t0368900-01 Rice cytosol 58.82 58.25
TraesCS5B01G049000.1 Wheat cytosol 49.02 58.14
Zm00001d023873_P001 Maize cytosol 58.82 57.69
Zm00001d027695_P001 Maize cytosol 58.82 57.69
GSMUA_Achr11P... Banana cytosol, extracellular 57.84 57.28
GSMUA_Achr8P09970_001 Banana cytosol 57.84 57.28
CDY54881 Canola cytosol 54.9 56.57
EES16092 Sorghum cytosol 57.84 56.19
CDY10229 Canola cytosol 53.92 55.56
GSMUA_Achr5P00370_001 Banana cytosol 55.88 55.34
HORVU5Hr1G010960.1 Barley cytosol 55.88 55.34
TraesCS5A01G044700.1 Wheat cytosol 55.88 55.34
TraesCS5B01G048900.1 Wheat cytosol 55.88 55.34
TraesCS5D01G054800.1 Wheat cytosol 55.88 55.34
TraesCS5D01G054900.1 Wheat cytosol 55.88 55.34
CDX76675 Canola cytosol 54.9 54.9
CDX89159 Canola cytosol 54.9 54.9
CDX93949 Canola cytosol 54.9 54.9
CDY11462 Canola cytosol 54.9 54.9
Zm00001d023870_P001 Maize cytosol, extracellular 55.88 54.81
CDY06230 Canola cytosol 52.94 54.55
CDY09953 Canola cytosol 52.94 54.55
TraesCS5A01G044100.1 Wheat cytosol 54.9 54.37
TraesCS5A01G044400.1 Wheat cytosol 54.9 54.37
TraesCS5B01G048300.1 Wheat cytosol 54.9 54.37
TraesCS5B01G048400.1 Wheat cytosol 54.9 54.37
TraesCS5B01G049100.1 Wheat cytosol 54.9 54.37
TraesCS5B01G049200.1 Wheat cytosol 54.9 54.37
TraesCS5D01G055100.1 Wheat cytosol 54.9 54.37
CDX84825 Canola cytosol 53.92 53.92
CDY23990 Canola cytosol 53.92 53.92
CDY29666 Canola cytosol 53.92 53.92
CDY52638 Canola cytosol 53.92 53.92
EES00745 Sorghum cytosol 53.92 53.4
GSMUA_Achr1P26720_001 Banana cytosol 53.92 53.4
GSMUA_AchrUn_... Banana cytosol, extracellular 53.92 53.4
HORVU5Hr1G010950.1 Barley cytosol 53.92 53.4
TraesCS5A01G044900.1 Wheat cytosol 53.92 53.4
TraesCS5A01G045000.1 Wheat cytosol 53.92 53.4
TraesCS5D01G054000.1 Wheat cytosol 53.92 53.4
CDX67910 Canola cytosol 52.94 52.94
CDY10745 Canola cytosol 52.94 52.94
CDY25124 Canola cytosol 52.94 52.94
GSMUA_Achr8P33660_001 Banana cytosol 52.94 52.43
TraesCS5A01G044800.1 Wheat cytosol 52.94 52.43
TraesCS5A01G094800.1 Wheat cytosol 52.94 52.43
TraesCS5D01G054200.1 Wheat cytosol 52.94 52.43
TraesCS5D01G055000.1 Wheat cytosol 52.94 52.43
TraesCS5D01G107300.1 Wheat cytosol 52.94 52.43
Zm00001d040836_P001 Maize cytosol 52.94 52.43
CDY27469 Canola cytosol 53.92 52.38
CDX97824 Canola cytosol 51.96 51.96
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 52.94 51.92
TraesCS3A01G462200.1 Wheat cytosol 52.94 51.92
TraesCS3A01G463200.1 Wheat cytosol 52.94 51.92
TraesCS3B01G504700.1 Wheat cytosol 52.94 51.92
TraesCS3B01G506400.1 Wheat cytosol 52.94 51.92
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 52.94 51.92
HORVU5Hr1G010870.1 Barley cytosol 51.96 51.46
TraesCS5B01G048600.1 Wheat cytosol 51.96 51.46
TraesCS5B01G101000.1 Wheat cytosol 51.96 51.46
CDY55528 Canola cytosol 52.94 51.43
CDX76678 Canola cytosol 50.98 50.98
CDX95739 Canola cytosol 50.98 50.98
Os12t0538700-01 Rice cytosol 51.96 50.96
TraesCS3A01G463000.1 Wheat cytosol 51.96 50.96
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 51.96 50.96
TraesCS3D01G456900.1 Wheat cytosol 51.96 50.96
TraesCS3D01G457200.1 Wheat cytosol 51.96 50.96
TraesCS4D01G147300.1 Wheat cytosol 51.96 50.96
TraesCS5A01G094500.1 Wheat cytosol 51.96 50.96
TraesCS5B01G100600.1 Wheat cytosol 51.96 50.96
TraesCS5D01G106800.1 Wheat cytosol 51.96 50.96
TraesCS5D01G054400.1 Wheat cytosol 50.98 50.49
HORVU5Hr1G033140.1 Barley cytosol 51.96 50.48
EES16097 Sorghum cytosol 52.94 50.47
OQU79243 Sorghum cytosol 52.94 50.47
CDX80139 Canola cytosol 50.0 50.0
CDX89162 Canola cytosol 50.0 50.0
CDY53024 Canola cytosol 50.0 50.0
CDY68061 Canola cytosol 50.0 50.0
HORVU3Hr1G099090.1 Barley cytosol 50.98 50.0
TraesCS3B01G505300.1 Wheat cytosol 50.98 50.0
TraesCS3B01G506200.1 Wheat cytosol 50.98 50.0
TraesCS3B01G506500.1 Wheat cytosol 50.98 50.0
EES02025 Sorghum cytosol 51.96 49.53
GSMUA_Achr7P03690_001 Banana cytosol 50.0 49.51
Os11t0655900-01 Rice extracellular 51.96 49.07
EES17138 Sorghum cytosol 50.98 49.06
Zm00001d023869_P001 Maize cytosol 50.0 49.04
CDY11466 Canola cytosol 49.02 49.02
Zm00001d042187_P001 Maize cytosol 51.96 47.75
EES16093 Sorghum cytosol 49.02 47.62
CDY53023 Canola cytosol 48.04 47.57
HORVU3Hr1G099050.2 Barley cytosol 50.0 47.22
TraesCS3A01G462900.1 Wheat cytosol, extracellular 48.04 47.12
Zm00001d048720_P001 Maize cytosol 50.98 46.85
EES08919 Sorghum cytosol 50.0 46.79
Os11t0656400-00 Rice cytosol, plastid 50.0 46.79
CDX80138 Canola cytosol 47.06 46.6
HORVU5Hr1G025690.1 Barley cytosol 50.98 46.43
Zm00001d048719_P001 Maize cytosol 50.0 46.36
Os11t0656000-00 Rice cytosol, plastid 49.02 45.87
Os11t0656700-00 Rice cytosol, plastid 49.02 45.87
CDX76677 Canola cytosol 46.08 45.63
CDX89161 Canola cytosol 46.08 45.63
CDY11464 Canola cytosol 46.08 45.63
CDY11465 Canola cytosol 46.08 45.63
Os05t0149950-00 Rice cytosol, mitochondrion 50.98 45.61
TraesCS3A01G462800.1 Wheat extracellular 36.27 45.12
EES08918 Sorghum cytosol, plastid 46.08 44.76
TraesCS3B01G506000.1 Wheat mitochondrion 35.29 43.9
EES16096 Sorghum cytosol 45.1 43.81
Zm00001d023872_P001 Maize cytosol, mitochondrion 45.1 43.81
HORVU3Hr1G099150.1 Barley cytosol, extracellular 26.47 41.54
CDX91918 Canola cytosol 53.92 41.04
Os01t0936000-00 Rice cytosol 50.0 40.8
CDX74327 Canola cytosol 52.94 39.42
HORVU5Hr1G025560.1 Barley cytosol 51.96 38.97
CDX70540 Canola cytosol 51.96 38.69
CDX78558 Canola cytosol 51.96 38.69
CDX85614 Canola cytosol 51.96 38.69
CDX91084 Canola cytosol 50.0 37.23
CDX69609 Canola cytosol 36.27 36.63
HORVU0Hr1G010190.2 Barley cytosol 37.25 36.19
CDY71728 Canola cytosol 45.1 32.39
CDX97821 Canola mitochondrion 39.22 30.08
CDY58422 Canola cytosol 40.2 24.4
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:A0A078JFI6UniProt:A0A078JFI6EnsemblPlants:CDY66333ProteinID:CDY66333
ProteinID:CDY66333.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091
GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725
GO:GO:0022900GO:GO:0045454GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00053385001InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgrInterPro:IPR002109PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168
PANTHER:PTHR10168:SF115SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0002544A97:
Description
BnaA01g35500DBnaA01g35500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JFI6]
Coordinates
chrLK035200:-:13725..14392
Molecular Weight (calculated)
11230.0 Da
IEP (calculated)
8.511
GRAVY (calculated)
0.252
Length
102 amino acids
Sequence
(BLAST)
001: MDKLQKMISE KSVVIFSKNS CCMSHTIKTL FIDFGVNPTI YELDEINRGK EIEQALAHLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL
Best Arabidopsis Sequence Match ( AT4G15680.1 )
(BLAST)
001: MDKLQKMISE KSVVIFSKNS CCMSHTIKTL FIDFGVNPTI YELDEINRGK EIEQALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRVGAL
101: WL
Arabidopsis Description
GRXS4Monothiol glutaredoxin-S4 [Source:UniProtKB/Swiss-Prot;Acc:O23419]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.