Factsheet for Zm00001d023873_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002027_P002
Zm00001d003948_P001
Zm00001d011997_P001
Zm00001d017793_P001
Zm00001d018225_P001
Zm00001d018530_P001
Zm00001d025238_P001
Zm00001d025584_P001
Zm00001d025585_P001
Zm00001d037140_P004
Zm00001d044973_P001
Zm00001d050565_P001
Zm00001d051589_P001
Zm00001d052133_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT2G30540.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT4G15700.1	Zm00001d002027_P002	AT1G22920.1	21798944
AT4G15700.1	Zm00001d018225_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d037140_P004	AT1G73360.1	21798944
AT4G15700.1	Zm00001d044973_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d052133_P001	AT1G73360.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05230.1	21798944
AT4G15700.1	Zm00001d003948_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d011997_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025238_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025584_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d025585_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d050565_P001	AT2G05250.1	21798944
AT4G15700.1	Zm00001d018530_P001	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16092	Sorghum	cytosol	98.08	97.14
Zm00001d023870_P001	Maize	cytosol, extracellular	88.46	88.46
HORVU5Hr1G025610.1	Barley	cytosol	87.5	87.5
TraesCS5A01G094600.1	Wheat	cytosol	87.5	87.5
TraesCS5B01G100700.1	Wheat	cytosol	86.54	86.54
TraesCS5D01G106900.1	Wheat	cytosol	86.54	86.54
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	84.62	85.44
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	84.62	85.44
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	84.62	85.44
TraesCS5A01G094900.1	Wheat	extracellular	83.65	84.47
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	83.65	84.47
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	82.69	83.5
TraesCS5A01G095500.1	Wheat	cytosol	81.73	82.52
Zm00001d048719_P001	Maize	cytosol	75.0	70.91
GSMUA_Achr11P...	Banana	cytosol, extracellular	70.19	70.87
Zm00001d040837_P001	Maize	cytosol	70.19	70.87
Zm00001d027695_P001	Maize	cytosol	68.27	68.27
GSMUA_Achr11P...	Banana	cytosol	67.31	67.96
GSMUA_Achr5P00380_001	Banana	extracellular	67.31	67.96
GSMUA_Achr5P00370_001	Banana	cytosol	66.35	66.99
Zm00001d023869_P001	Maize	cytosol	66.35	66.35
GSMUA_Achr1P26720_001	Banana	cytosol	65.38	66.02
Zm00001d040836_P001	Maize	cytosol	64.42	65.05
KRH02215	Soybean	cytosol	63.46	64.71
KRH11237	Soybean	cytosol	63.46	64.71
GSMUA_Achr7P03690_001	Banana	cytosol	63.46	64.08
Zm00001d048720_P001	Maize	cytosol	68.27	63.96
KRH50911	Soybean	cytosol	62.5	63.73
GSMUA_Achr8P33660_001	Banana	cytosol	62.5	63.11
GSMUA_AchrUn_...	Banana	cytosol, extracellular	62.5	63.11
Bra023688.1-P	Field mustard	cytosol	61.54	62.75
KRH21036	Soybean	cytosol	61.54	62.75
Solyc01g067440.2.1	Tomato	cytosol	61.54	62.75
Bra006467.1-P	Field mustard	cytosol	60.58	61.76
CDX70828	Canola	cytosol	60.58	61.76
CDX88929	Canola	cytosol	60.58	61.76
CDY02610	Canola	cytosol	60.58	61.76
CDY68328	Canola	cytosol	60.58	61.76
PGSC0003DMT400058325	Potato	cytosol	60.58	61.76
VIT_05s0020g01750.t01	Wine grape	cytosol	60.58	61.16
AT4G15700.1	Thale cress	cytosol	59.62	60.78
Bra002171.1-P	Field mustard	cytosol	59.62	60.78
CDX92597	Canola	cytosol	59.62	60.78
CDY13904	Canola	cytosol	59.62	60.78
Solyc01g067460.1.1	Tomato	cytosol	59.62	60.78
VIT_05s0020g01760.t01	Wine grape	cytosol	59.62	60.78
PGSC0003DMT400058374	Potato	cytosol	58.65	59.8
KRG96386	Soybean	cytosol	57.69	59.41
KRH71536	Soybean	extracellular	57.69	59.41
Zm00001d023872_P001	Maize	cytosol, mitochondrion	59.62	59.05
AT4G15660.1	Thale cress	cytosol, extracellular	57.69	58.82
AT5G18600.1	Thale cress	cytosol	57.69	58.82
Bra033503.1-P	Field mustard	cytosol	57.69	58.82
CDY66333	Canola	cytosol	57.69	58.82
KRH11238	Soybean	cytosol	57.69	58.82
Zm00001d042187_P001	Maize	cytosol	62.5	58.56
KRH68125	Soybean	cytosol	56.73	58.42
AT4G15670.1	Thale cress	cytosol	56.73	57.84
AT4G15680.1	Thale cress	cytosol	56.73	57.84
AT4G15690.1	Thale cress	cytosol	56.73	57.84
Bra033501.1-P	Field mustard	cytosol	56.73	57.84
KRH21035	Soybean	cytosol	56.73	57.84
Bra033504.1-P	Field mustard	cytosol	52.88	57.29
Bra012773.1-P	Field mustard	cytosol	55.77	56.86
CDX90576	Canola	cytosol	55.77	56.86
CDY09747	Canola	cytosol	55.77	56.86
CDY22746	Canola	cytosol	55.77	56.86
CDY54294	Canola	cytosol	55.77	56.86
CDY66332	Canola	cytosol	55.77	56.86
KRH50912	Soybean	cytosol	55.77	56.86
PGSC0003DMT400029525	Potato	cytosol	55.77	56.86
KRH31919	Soybean	cytosol, plasma membrane	54.81	56.44
Bra038075.1-P	Field mustard	cytosol	54.81	55.88
CDY54296	Canola	cytosol	54.81	55.88
PGSC0003DMT400029597	Potato	cytosol	54.81	55.88
Solyc09g074590.1.1	Tomato	cytosol	54.81	55.88
Solyc09g074600.1.1	Tomato	cytosol	54.81	55.88
VIT_07s0104g01390.t01	Wine grape	plasma membrane	54.81	55.88
Bra038076.1-P	Field mustard	cytosol, extracellular	53.85	55.45
CDY09078	Canola	cytosol, extracellular	53.85	55.45
CDY22745	Canola	cytosol, extracellular	53.85	55.45
AT2G47870.1	Thale cress	cytosol	54.81	55.34
Bra033499.1-P	Field mustard	cytosol	51.92	55.1
AT3G21460.1	Thale cress	mitochondrion	53.85	54.9
CDY69190	Canola	cytosol	54.81	54.81
Solyc06g008760.1.1	Tomato	cytosol	52.88	54.46
Bra001831.1-P	Field mustard	cytosol	52.88	53.92
Bra004424.1-P	Field mustard	cytosol	52.88	53.92
CDX80139	Canola	cytosol	52.88	53.92
CDY09079	Canola	cytosol	52.88	53.92
CDY32431	Canola	cytosol	52.88	53.92
CDY48891	Canola	cytosol	52.88	53.92
CDY53024	Canola	cytosol	52.88	53.92
AT1G06830.1	Thale cress	cytosol	50.96	53.54
CDY53023	Canola	cytosol	52.88	53.4
CDY32430	Canola	cytosol, plastid	51.92	52.94
KRG96387	Soybean	cytosol	51.92	52.94
KRH31918	Soybean	cytosol	51.92	52.94
KRH68127	Soybean	cytosol	51.92	52.94
KRH71537	Soybean	cytosol	51.92	52.94
PGSC0003DMT400041381	Potato	cytosol, plastid	51.92	52.94
Solyc06g008750.1.1	Tomato	cytosol	51.92	52.94
Bra031540.1-P	Field mustard	cytosol	50.0	52.53
CDY06230	Canola	cytosol	50.0	52.53
CDY09953	Canola	cytosol	50.0	52.53
CDY10229	Canola	cytosol	50.0	52.53
Bra004426.1-P	Field mustard	cytosol	51.92	52.43
CDX80138	Canola	cytosol	51.92	52.43
CDY27469	Canola	cytosol	52.88	52.38
AT2G47880.1	Thale cress	cytosol	50.96	51.96
Bra001830.1-P	Field mustard	cytosol, plastid	50.96	51.96
Bra023883.1-P	Field mustard	cytosol, plastid	50.96	51.96
CDY19270	Canola	cytosol, plastid	50.96	51.96
CDY37292	Canola	cytosol, plastid	50.96	51.96
CDY48890	Canola	cytosol, plastid	50.96	51.96
PGSC0003DMT400013649	Potato	cytosol	50.96	51.96
PGSC0003DMT400079099	Potato	cytosol	48.08	51.55
PGSC0003DMT400042706	Potato	cytosol	50.96	51.46
Solyc06g054570.1.1	Tomato	cytosol	50.96	51.46
CDY55528	Canola	cytosol	51.92	51.43
AT2G30540.1	Thale cress	cytosol	50.0	50.98
CDX95739	Canola	cytosol	50.0	50.98
PGSC0003DMT400029596	Potato	cytosol	50.0	50.98
Solyc04g011790.1.1	Tomato	cytosol, plastid	50.0	50.98
PGSC0003DMT400041379	Potato	cytosol, plastid	46.15	50.53
CDY54881	Canola	cytosol	48.08	50.51
Bra021444.1-P	Field mustard	cytosol	50.96	50.48
AT3G62960.1	Thale cress	cytosol	49.04	50.0
Bra007718.1-P	Field mustard	cytosol	49.04	50.0
Bra021641.1-P	Field mustard	cytosol	49.04	50.0
CDX76678	Canola	cytosol	49.04	50.0
CDY11466	Canola	cytosol	49.04	50.0
CDY23990	Canola	cytosol	49.04	50.0
CDY29666	Canola	cytosol	49.04	50.0
CDY52638	Canola	cytosol	49.04	50.0
PGSC0003DMT400041380	Potato	cytosol, plastid	49.04	50.0
Solyc04g011870.1.1	Tomato	cytosol, plastid	49.04	50.0
Solyc09g074580.1.1	Tomato	cytosol	49.04	50.0
VIT_07s0104g01400.t01	Wine grape	cytosol	49.04	50.0
AT3G62950.1	Thale cress	cytosol	49.04	49.51
Bra014380.1-P	Field mustard	cytosol	49.04	49.51
CDX89161	Canola	cytosol	49.04	49.51
Bra007717.1-P	Field mustard	cytosol	36.54	49.35
Zm00001d016593_P001	Maize	cytosol	61.54	49.23
Bra014379.1-P	Field mustard	cytosol	48.08	49.02
Bra018307.1-P	Field mustard	cytosol	48.08	49.02
CDX84825	Canola	cytosol	48.08	49.02
CDX89162	Canola	cytosol	48.08	49.02
CDY10745	Canola	cytosol	48.08	49.02
CDY68061	Canola	cytosol	48.08	49.02
PGSC0003DMT400027946	Potato	cytosol, plastid	48.08	49.02
PGSC0003DMT400041382	Potato	cytosol	48.08	49.02
Solyc04g011830.1.1	Tomato	cytosol, plastid	48.08	49.02
Solyc04g011850.1.1	Tomato	cytosol	48.08	49.02
CDX76677	Canola	cytosol	48.08	48.54
CDY11464	Canola	cytosol	48.08	48.54
CDY11465	Canola	cytosol	48.08	48.54
Solyc04g011820.1.1	Tomato	cytosol	44.23	48.42
Bra003517.1-P	Field mustard	cytosol, extracellular	47.12	48.04
CDX97824	Canola	cytosol	47.12	48.04
KRH31917	Soybean	cytosol	47.12	48.04
PGSC0003DMT400027948	Potato	cytosol, plastid	47.12	48.04
PGSC0003DMT400027950	Potato	cytosol, plastid	47.12	48.04
PGSC0003DMT400027951	Potato	cytosol, plastid	47.12	48.04
Solyc04g011810.1.1	Tomato	cytosol, plastid	47.12	48.04
Solyc04g011860.1.1	Tomato	cytosol, plastid	47.12	48.04
PGSC0003DMT400027953	Potato	cytosol, plastid	46.15	47.52
PGSC0003DMT400027952	Potato	cytosol	43.27	47.37
KRH68129	Soybean	cytosol	46.15	47.06
KRH71538	Soybean	cytosol	46.15	47.06
PGSC0003DMT400027947	Potato	cytosol, plastid	46.15	47.06
PGSC0003DMT400027949	Potato	cytosol, plastid	46.15	47.06
PGSC0003DMT400027954	Potato	cytosol, plastid	46.15	47.06
PGSC0003DMT400041378	Potato	cytosol, plastid	46.15	47.06
Solyc04g011800.1.1	Tomato	cytosol, plastid	46.15	47.06
Solyc04g011840.1.1	Tomato	cytosol	46.15	47.06
Zm00001d003927_P001	Maize	cytosol	61.54	46.72
PGSC0003DMT400029673	Potato	cytosol	47.12	46.23
Bra032563.1-P	Field mustard	cytosol	45.19	46.08
CDY32493	Canola	cytosol	45.19	46.08
KRG96389	Soybean	cytosol	45.19	46.08
Solyc04g011780.1.1	Tomato	extracellular	45.19	46.08
Solyc04g011880.1.1	Tomato	cytosol, plastid	45.19	46.08
VIT_07s0104g01420.t01	Wine grape	cytosol	46.15	45.28
AT1G03020.1	Thale cress	cytosol	44.23	45.1
CDY18141	Canola	cytosol	44.23	45.1
Solyc05g051730.1.1	Tomato	cytosol	44.23	44.66
Solyc09g074570.1.1	Tomato	cytosol	45.19	44.34
PGSC0003DMT400077394	Potato	cytosol	44.23	44.23
Solyc05g051720.1.1	Tomato	cytosol	44.23	44.23
Bra003515.1-P	Field mustard	cytosol	43.27	44.12
Bra014382.1-P	Field mustard	cytosol	43.27	44.12
Bra033366.1-P	Field mustard	cytosol	43.27	44.12
CDX67910	Canola	cytosol	43.27	44.12
CDX76675	Canola	cytosol	43.27	44.12
CDX89159	Canola	cytosol	43.27	44.12
CDX89921	Canola	cytosol	43.27	44.12
CDX93949	Canola	cytosol	43.27	44.12
PGSC0003DMT400077393	Potato	cytosol	43.27	43.69
AT3G62930.1	Thale cress	cytosol	42.31	43.14
Bra007714.1-P	Field mustard	cytosol	42.31	43.14
CDY11462	Canola	cytosol	42.31	43.14
CDY25124	Canola	cytosol	42.31	43.14
Solyc04g053110.1.1	Tomato	cytosol	41.35	42.16
KRH31916	Soybean	cytosol	38.46	42.11
PGSC0003DMT400042707	Potato	cytosol	40.38	41.18
KRH68130	Soybean	cytosol, plastid	39.42	39.05
KRG96390	Soybean	cytosol, plastid	38.46	38.1
KRH31915	Soybean	cytosol, plastid	36.54	36.19
Zm00001d018802_P001	Maize	cytosol	51.92	33.96
Bra015532.1-P	Field mustard	cytosol	45.19	32.41
CDY71728	Canola	cytosol	40.38	29.58
CDX97821	Canola	mitochondrion	35.58	27.82
PGSC0003DMT400013650	Potato	cytosol	40.38	14.24

Protein Annotations

EntrezGene:103648196	MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:A0A1D6IWK8	ProteinID:AQK40305.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10168	PANTHER:PTHR10168:SF98	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0004DE9D77
EnsemblPlantsGene:Zm00001d023873	EnsemblPlants:Zm00001d023873_P001	EnsemblPlants:Zm00001d023873_T001	:	:	:

Description

Glutaredoxin-C13

Coordinates

chr10:-:25872396..25872710

Molecular Weight (calculated)

11105.0 Da

IEP (calculated)

8.967

GRAVY (calculated)

0.426

Length

104 amino acids

Sequence
(BLAST)

001: MERVMKIASE RAVVVFTLSS CCMCHTVTRL MADLGVNALV HELDSDPRGK DMERALLKML GGRGPAVPAV FIGGKLVGGT NRVMSLHLAG ELVPMLKSAG
101: ALWL

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.