Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07800 | Sorghum | plastid | 93.72 | 79.84 |
| Os02t0828566-01 | Rice | nucleus | 82.61 | 72.46 |
| TraesCS6D01G397000.1 | Wheat | mitochondrion | 60.39 | 63.45 |
| TraesCS6B01G462100.1 | Wheat | mitochondrion | 59.9 | 62.63 |
| TraesCS6A01G412800.1 | Wheat | mitochondrion | 59.9 | 62.63 |
| HORVU6Hr1G093960.1 | Barley | cytosol, peroxisome | 78.74 | 61.05 |
| CDY40752 | Canola | cytosol | 48.79 | 57.06 |
| CDX78335 | Canola | nucleus | 48.31 | 56.82 |
| CDX87179 | Canola | nucleus | 57.97 | 55.81 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 65.7 | 55.74 |
| CDX81094 | Canola | nucleus | 48.31 | 55.56 |
| Bra026506.1-P | Field mustard | cytosol, mitochondrion, nucleus | 57.97 | 55.56 |
| CDY16842 | Canola | nucleus | 57.49 | 55.35 |
| CDY44770 | Canola | cytosol | 57.0 | 52.44 |
| Bra029366.1-P | Field mustard | cytosol | 44.44 | 52.27 |
| VIT_10s0042g00170.t01 | Wine grape | nucleus | 63.77 | 51.76 |
| KRH36141 | Soybean | nucleus | 61.35 | 51.63 |
| Bra028662.1-P | Field mustard | nucleus | 56.04 | 50.66 |
| Bra005984.1-P | Field mustard | nucleus | 57.0 | 50.43 |
| KRG89108 | Soybean | nucleus, plastid | 56.04 | 50.0 |
| AT5G08330.1 | Thale cress | nucleus | 57.49 | 49.79 |
| KRG90619 | Soybean | nucleus | 57.97 | 49.59 |
| Bra009338.1-P | Field mustard | nucleus | 56.52 | 49.58 |
| CDY46951 | Canola | nucleus | 55.07 | 49.57 |
| KRH40904 | Soybean | nucleus | 56.52 | 48.95 |
| CDY45760 | Canola | nucleus | 57.0 | 48.76 |
| KRH40902 | Soybean | nucleus | 56.52 | 48.75 |
| CDY21536 | Canola | nucleus | 55.07 | 48.31 |
| Bra009667.1-P | Field mustard | nucleus | 57.97 | 48.0 |
| CDY40799 | Canola | nucleus | 53.14 | 47.83 |
| Solyc04g009180.1.1 | Tomato | nucleus | 61.35 | 47.74 |
| CDX88010 | Canola | nucleus | 57.97 | 47.43 |
| Solyc01g008230.2.1 | Tomato | nucleus | 56.52 | 46.99 |
| AT5G23280.1 | Thale cress | nucleus | 56.04 | 46.4 |
| Zm00001d025896_P001 | Maize | plastid | 43.48 | 43.48 |
| Zm00001d017350_P001 | Maize | plastid | 45.89 | 43.18 |
| Zm00001d051216_P001 | Maize | plastid | 44.93 | 42.66 |
| Zm00001d025033_P001 | Maize | plastid | 27.54 | 32.39 |
| PGSC0003DMT400042166 | Potato | cytosol | 55.56 | 25.67 |
| Zm00001d011985_P001 | Maize | nucleus | 35.27 | 23.17 |
| Zm00001d042305_P001 | Maize | cytosol, mitochondrion, nucleus | 34.78 | 22.22 |
| Zm00001d044836_P001 | Maize | nucleus | 36.23 | 21.01 |
| Zm00001d031725_P001 | Maize | nucleus | 34.78 | 20.57 |
| Zm00001d023565_P001 | Maize | nucleus | 40.1 | 20.49 |
| Zm00001d037221_P001 | Maize | cytosol, nucleus, peroxisome | 36.72 | 20.05 |
| Zm00001d052256_P001 | Maize | cytosol, nucleus, peroxisome | 37.68 | 20.05 |
| Zm00001d004791_P001 | Maize | mitochondrion, nucleus | 19.81 | 20.0 |
| Zm00001d053020_P001 | Maize | cytosol, nucleus, plastid | 37.2 | 19.9 |
| Zm00001d018045_P001 | Maize | cytosol, nucleus, peroxisome | 37.68 | 19.5 |
| Zm00001d041866_P001 | Maize | nucleus | 38.65 | 19.23 |
| Zm00001d031597_P001 | Maize | cytosol, nucleus, plasma membrane, plastid | 25.6 | 19.2 |
| Zm00001d006165_P001 | Maize | nucleus | 30.43 | 19.09 |
| Zm00001d038444_P001 | Maize | nucleus | 25.6 | 17.85 |
| Zm00001d044344_P001 | Maize | nucleus | 25.6 | 17.85 |
Protein Annotations
| EntrezGene:100278144 | MapMan:15.5.19 | MapMan:27.1.5.3 | ProteinID:AIB05186.1 | ProteinID:AQK76400.1 | UniProt:B6U4G2 |
| EMBL:EU972127 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | PFAM:PF03634 |
| PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF7 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000182F96E |
| EnsemblPlantsGene:Zm00001d018530 | EnsemblPlants:Zm00001d018530_P001 | EnsemblPlants:Zm00001d018530_T001 | SEG:seg | : | : |
Description
TCP-transcription factor 4Transcription factor TCP21
Coordinates
chr5:-:222531797..222532420
Molecular Weight (calculated)
21116.8 Da
IEP (calculated)
10.898
GRAVY (calculated)
-0.239
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTRPDGSAS TPADKQLVAA SNGNGNGNPL AVRKAPSKDR HSKVDGRGRR IRMPIICAAR VFQLTRELGH KSDGQTIEWL LRQAEPSIIA ATGTGTTPAS
101: FSTSSPSSLR SSSSSTAGVH PHAAPAQGFW ALPARADFGQ LWSFAAAPEM MVAAAAAAAP GMAGEASAAR VGNYLPVAQG NLNLLASFSG GPAPTAAAGR
201: AEEETAR
101: FSTSSPSSLR SSSSSTAGVH PHAAPAQGFW ALPARADFGQ LWSFAAAPEM MVAAAAAAAP GMAGEASAAR VGNYLPVAQG NLNLLASFSG GPAPTAAAGR
201: AEEETAR
001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
Arabidopsis Description
TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.