Factsheet for Zm00001d051216_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017350_P001	Maize	plastid	83.03	82.27
EES05476	Sorghum	plastid	82.11	80.63
TraesCS6A01G233800.1	Wheat	plastid	64.68	69.46
TraesCS6D01G216100.1	Wheat	plastid	65.14	68.93
TraesCS6B01G262600.1	Wheat	plastid	62.84	68.84
Os02t0635800-01	Rice	nucleus	65.14	67.3
Zm00001d025896_P001	Maize	plastid	57.8	60.87
HORVU6Hr1G059930.1	Barley	plastid	61.47	58.01
Zm00001d018530_P001	Maize	plastid	42.66	44.93
Zm00001d025033_P001	Maize	plastid	24.77	30.68
GSMUA_Achr2P10690_001	Banana	cytosol, mitochondrion, nucleus, plastid	24.77	25.59
Zm00001d004791_P001	Maize	mitochondrion, nucleus	19.72	20.98
Zm00001d044836_P001	Maize	nucleus	33.03	20.17
Zm00001d011985_P001	Maize	nucleus	27.98	19.37
Zm00001d053020_P001	Maize	cytosol, nucleus, plastid	33.95	19.12
Zm00001d023565_P001	Maize	nucleus	35.32	19.01
Zm00001d006165_P001	Maize	nucleus	28.44	18.79
Zm00001d042305_P001	Maize	cytosol, mitochondrion, nucleus	27.52	18.52
Zm00001d037221_P001	Maize	cytosol, nucleus, peroxisome	32.11	18.47
Zm00001d041866_P001	Maize	nucleus	34.86	18.27
Zm00001d031725_P001	Maize	nucleus	28.9	18.0
Zm00001d052256_P001	Maize	cytosol, nucleus, peroxisome	31.65	17.74
Zm00001d018045_P001	Maize	cytosol, nucleus, peroxisome	31.65	17.25
Zm00001d031597_P001	Maize	cytosol, nucleus, plasma membrane, plastid	19.27	15.22
Zm00001d038444_P001	Maize	nucleus	19.72	14.48
Zm00001d044344_P001	Maize	nucleus	19.72	14.48

Protein Annotations

MapMan:15.5.19	MapMan:27.1.5.3	ProteinID:AQK53842.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	UniProt:K7TYK6	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF31	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000220BDB6	EnsemblPlantsGene:Zm00001d051216	EnsemblPlants:Zm00001d051216_P001
EnsemblPlants:Zm00001d051216_T001	SEG:seg	:	:	:	:

Description

TCP-transcription factor 25TCP-domain protein

Coordinates

chr4:+:148970275..148970931

Molecular Weight (calculated)

22971.0 Da

IEP (calculated)

10.572

GRAVY (calculated)

-0.399

Length

218 amino acids

Sequence
(BLAST)

001: MATTRDVSAA SAAAMFHVYQ PMPMPSTAAA PAKAGKKEGG KDRHSKVNGR GRRVRMPIVC AARVFQLTRE LGLKSDGQTI EWLLRQAEPS IVAATGSGTT
101: PAVFVSSSAP STSSSSHSHY QQQQQQQQAT VVVLGKRPRE EGGDAAAASV PAFWAAAPRT TAAADASWGF SPLEAQQAAA GYVPMAQAQQ QQHHHHHLNL
201: LAALSGAARR AEAAEETR

Best Arabidopsis Sequence Match ( AT5G23280.1 )
(BLAST)

001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR

Arabidopsis Description

TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.