Factsheet for HORVU6Hr1G059930.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G233800.1	Wheat	plastid	74.89	85.22
TraesCS6D01G216100.1	Wheat	plastid	75.32	84.47
TraesCS6B01G262600.1	Wheat	plastid	71.86	83.42
Os02t0635800-01	Rice	nucleus	60.17	65.88
EES05476	Sorghum	plastid	60.17	62.61
Zm00001d051216_P001	Maize	plastid	58.01	61.47
Zm00001d017350_P001	Maize	plastid	56.71	59.55
HORVU2Hr1G090640.1	Barley	plastid	46.75	53.47
HORVU6Hr1G093960.1	Barley	cytosol, peroxisome	40.26	34.83
GSMUA_Achr2P10690_001	Banana	cytosol, mitochondrion, nucleus, plastid	21.64	23.7
HORVU5Hr1G035980.1	Barley	cytosol	32.03	19.42
HORVU4Hr1G019380.1	Barley	nucleus, plastid	31.17	18.75
HORVU5Hr1G117990.1	Barley	cytosol, mitochondrion, nucleus	28.14	17.33
HORVU5Hr1G080210.1	Barley	cytosol	20.35	17.22
HORVU7Hr1G038130.1	Barley	nucleus	28.57	16.5
HORVU6Hr1G075650.1	Barley	nucleus	28.57	16.42
HORVU3Hr1G095400.2	Barley	golgi, plasma membrane	25.97	12.9

Protein Annotations

MapMan:15.5.19	UniProt:A0A287UBY7	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU6Hr1G059930
EnsemblPlants:HORVU6Hr1G059930.1	InterPro:IPR017887	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF31
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000B47E502	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:396742196..396743143

Molecular Weight (calculated)

24553.0 Da

IEP (calculated)

9.900

GRAVY (calculated)

-0.313

Length

231 amino acids

Sequence
(BLAST)

001: LHPVTSKPHK PHRITTPTTS SLSSVRRAKQ SADAMTSHDI AAAPSPFHVY QQHLPMTVAP SPDVGLAPAP SKEAGGSVKG HSKVNGRGQR VRMPIVCAAR
101: VFQLTRELGL KSDGQTIEWL LRQAEPSILA ATGTGTAPAA FVSSSTPSTS SSSFSYPHTL LGKRPREEND AVGAAAAASA FWAALPWQDD WGFSPLEAQA
201: TYMPMAQVHQ HHLDLVAAVS GAARRAEEEI R

Best Arabidopsis Sequence Match ( AT5G23280.1 )
(BLAST)

001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR

Arabidopsis Description

TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.