Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G376000.1 | Wheat | plastid | 97.52 | 96.1 |
| TraesCS2D01G372200.1 | Wheat | plastid | 97.03 | 95.61 |
| Os04t0526000-01 | Rice | plastid | 79.7 | 78.16 |
| TraesCS2B01G392900.1 | Wheat | cytosol | 95.54 | 76.89 |
| Zm00001d025896_P001 | Maize | plastid | 74.75 | 72.95 |
| EES11145 | Sorghum | plastid | 73.76 | 71.98 |
| HORVU6Hr1G059930.1 | Barley | plastid | 53.47 | 46.75 |
| HORVU6Hr1G093960.1 | Barley | cytosol, peroxisome | 46.53 | 35.21 |
| GSMUA_Achr2P10690_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 24.26 | 23.22 |
| HORVU4Hr1G019380.1 | Barley | nucleus, plastid | 38.61 | 20.31 |
| HORVU5Hr1G035980.1 | Barley | cytosol | 36.63 | 19.42 |
| HORVU5Hr1G117990.1 | Barley | cytosol, mitochondrion, nucleus | 32.67 | 17.6 |
| HORVU5Hr1G080210.1 | Barley | cytosol | 23.76 | 17.58 |
| HORVU6Hr1G075650.1 | Barley | nucleus | 34.65 | 17.41 |
| HORVU7Hr1G038130.1 | Barley | nucleus | 32.67 | 16.5 |
| HORVU3Hr1G095400.2 | Barley | golgi, plasma membrane | 29.21 | 12.69 |
Protein Annotations
| MapMan:15.5.19 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU2Hr1G090640 |
| EnsemblPlants:HORVU2Hr1G090640.1 | InterPro:IPR017887 | UniProt:M0YSG5 | PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF31 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0002963BA2 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:645146133..645147494
Molecular Weight (calculated)
21429.5 Da
IEP (calculated)
10.368
GRAVY (calculated)
-0.280
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDAATFQ LYRPMAMPTA TPMSQTMAMP VFSSAEAADD AVVAVPAPRK AGAAKGAKDR HSKVNGRGRR VRMPIVCAAR VFQLTRELGL KSDGQTVEWL
101: LRQAEPSIMA ATGSGTTPAV FSCSSAPSTA GVSLLGKRPR EDHEAAPSFW EALQARPVPW GLSPSLEAQA YASSVAQGHH HHLNLLSALS GASRRPAEEE
201: SR
101: LRQAEPSIMA ATGSGTTPAV FSCSSAPSTA GVSLLGKRPR EDHEAAPSFW EALQARPVPW GLSPSLEAQA YASSVAQGHH HHLNLLSALS GASRRPAEEE
201: SR
001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
Arabidopsis Description
TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.