Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025896_P001 | Maize | plastid | 86.47 | 86.47 |
| HORVU2Hr1G090640.1 | Barley | plastid | 71.98 | 73.76 |
| TraesCS2A01G376000.1 | Wheat | plastid | 72.95 | 73.66 |
| TraesCS2D01G372200.1 | Wheat | plastid | 72.46 | 73.17 |
| Os04t0526000-01 | Rice | plastid | 71.01 | 71.36 |
| EES05476 | Sorghum | plastid | 64.25 | 59.91 |
| TraesCS2B01G392900.1 | Wheat | cytosol | 71.5 | 58.96 |
| EES07800 | Sorghum | plastid | 47.83 | 40.74 |
| EES10469 | Sorghum | plastid | 27.54 | 32.2 |
| GSMUA_Achr2P10690_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 23.67 | 23.22 |
| EES01992 | Sorghum | nucleus | 29.47 | 18.77 |
| EER99208 | Sorghum | nucleus | 28.99 | 18.4 |
| EER88112 | Sorghum | nucleus | 34.78 | 18.27 |
| OQU80770 | Sorghum | nucleus | 31.4 | 18.11 |
| EES07255 | Sorghum | nucleus | 34.3 | 17.84 |
Protein Annotations
| MapMan:15.5.19 | UniProt:C5YCH7 | EnsemblPlants:EES11145 | ProteinID:EES11145 | ProteinID:EES11145.2 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF31 | EnsemblPlantsGene:SORBI_3006G154000 | unigene:Sbi.1213 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI00081AEB08 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:51401940..51402563
Molecular Weight (calculated)
21340.3 Da
IEP (calculated)
10.316
GRAVY (calculated)
-0.253
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDGAATF QVYRPMPAPS PAPPPMSLSA AAADAAAPAP KKAKSPGGAC KDRHSKVNGR GRRVRMPIVC AARVFQLTRE LGLKSDGQTI EWLLHQAEPS
101: ILAATGSGTT PAVFSCSSAP STSAGAGASL TLLGKRPREE HEPAPAPAPF WVTPTLQARP VAASWGLSPA QEAAAQAYAS VAAQGHHHLN LLSVLSGATR
201: PSEEESR
101: ILAATGSGTT PAVFSCSSAP STSAGAGASL TLLGKRPREE HEPAPAPAPF WVTPTLQARP VAASWGLSPA QEAAAQAYAS VAAQGHHHLN LLSVLSGATR
201: PSEEESR
001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR
Arabidopsis Description
TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.