Factsheet for Zm00001d025896_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11145	Sorghum	plastid	86.47	86.47
TraesCS2A01G376000.1	Wheat	plastid	74.4	75.12
HORVU2Hr1G090640.1	Barley	plastid	72.95	74.75
TraesCS2D01G372200.1	Wheat	plastid	73.91	74.63
Os04t0526000-01	Rice	plastid	71.5	71.84
TraesCS2B01G392900.1	Wheat	cytosol	72.95	60.16
Zm00001d017350_P001	Maize	plastid	61.84	58.18
Zm00001d051216_P001	Maize	plastid	60.87	57.8
Zm00001d018530_P001	Maize	plastid	43.48	43.48
Zm00001d025033_P001	Maize	plastid	27.05	31.82
GSMUA_Achr2P10690_001	Banana	cytosol, mitochondrion, nucleus, plastid	25.12	24.64
Zm00001d004791_P001	Maize	mitochondrion, nucleus	21.74	21.95
Zm00001d023565_P001	Maize	nucleus	39.61	20.25
Zm00001d053020_P001	Maize	cytosol, nucleus, plastid	36.23	19.38
Zm00001d011985_P001	Maize	nucleus	29.47	19.37
Zm00001d041866_P001	Maize	nucleus	38.65	19.23
Zm00001d031725_P001	Maize	nucleus	32.37	19.14
Zm00001d042305_P001	Maize	cytosol, mitochondrion, nucleus	29.47	18.83
Zm00001d006165_P001	Maize	nucleus	29.95	18.79
Zm00001d044836_P001	Maize	nucleus	31.4	18.21
Zm00001d052256_P001	Maize	cytosol, nucleus, peroxisome	32.37	17.22
Zm00001d037221_P001	Maize	cytosol, nucleus, peroxisome	31.4	17.15
Zm00001d031597_P001	Maize	cytosol, nucleus, plasma membrane, plastid	22.22	16.67
Zm00001d018045_P001	Maize	cytosol, nucleus, peroxisome	31.88	16.5
Zm00001d038444_P001	Maize	nucleus	22.71	15.82
Zm00001d044344_P001	Maize	nucleus	22.71	15.82

Protein Annotations

MapMan:15.5.19	MapMan:27.1.5.3	ProteinID:AIB05187.1	ProteinID:AQK44970.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	UniProt:K7TM60	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF31	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0002218BF5	EnsemblPlantsGene:Zm00001d025896	EnsemblPlants:Zm00001d025896_P001
EnsemblPlants:Zm00001d025896_T001	SEG:seg	:	:	:	:

Description

TCP-transcription factor 14Transcription factor TCP21

Coordinates

chr10:+:133245638..133246261

Molecular Weight (calculated)

21012.0 Da

IEP (calculated)

10.600

GRAVY (calculated)

-0.049

Length

207 amino acids

Sequence
(BLAST)

001: MASRDGATFQ VYRAMPAPTP MSLASAAPAA ADAAAPKKAG AGAGKDRHSK VNGRGRRVRM PIVCAARVFQ LTRELGLKSD GQTIEWLLRQ AEPSILAATG
101: SGTTPAVFSC SSAPSTSAAS AGAGAGVSLP LLGKRPREEH EPAVAVAVAP APFWATLQAR PVAAAWGLSP AQEAAAQAYA SVAAQGHHLN LLSVLSGAAR
201: PSEEESR

Best Arabidopsis Sequence Match ( AT5G23280.1 )
(BLAST)

001: MSINNNNNNN NNNNDGLMIS SNGALIEQQP SVVVKKPPAK DRHSKVDGRG RRIRMPIICA ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP
101: ASFSTASVSI RGATNSTSLD HKPTSLLGGT SPFILGKRVR ADEDSNNSHN HSSVGKDETF TTTPAGFWAV PARPDFGQVW SFAGAPQEMF LQQQHHHQQP
201: LFVHQQQQQQ AAMGEASAAR VGNYLPGHLN LLASLSGGSP GSDRREEDPR

Arabidopsis Description

TCP7Transcription factor TCP7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.