Factsheet for Zm00001d051459_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d011755_P001
Zm00001d043464_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05510.1	Zm00001d011755_P001	AT1G29680.1	21798944
AT1G05510.1	Zm00001d043464_P001	AT1G29680.1	21798944
AT2G31985.1	Zm00001d011755_P001	AT1G29680.1	21798944
AT2G31985.1	Zm00001d043464_P001	AT1G29680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05730	Sorghum	cytosol	94.96	94.96
TraesCS5D01G250600.1	Wheat	cytosol	86.13	86.86
TraesCS5A01G243900.1	Wheat	cytosol	85.71	86.44
TraesCS5A01G239600.1	Wheat	cytosol	80.67	86.1
TraesCS5B01G241900.1	Wheat	cytosol	85.29	86.02
VIT_05s0062g00810.t01	Wine grape	cytosol	68.49	69.96
PGSC0003DMT400016814	Potato	cytosol	65.97	65.97
GSMUA_AchrUn_...	Banana	cytosol	64.29	65.38
Solyc09g098120.2.1	Tomato	cytosol	65.13	65.13
HORVU5Hr1G069360.3	Barley	cytosol	69.75	64.84
Os05t0569500-01	Rice	cytosol, plastid	69.75	64.59
CDY68306	Canola	cytosol	63.87	63.07
Bra021765.1-P	Field mustard	cytosol	63.87	63.07
CDY66704	Canola	cytosol	63.45	62.66
AT1G05510.1	Thale cress	cytosol	62.6	61.83
CDY47277	Canola	cytosol	62.18	61.41
CDY10117	Canola	cytosol	62.18	61.41
Bra015432.1-P	Field mustard	cytosol	62.18	61.41
AT2G31985.1	Thale cress	cytosol	62.18	61.41
KRH31541	Soybean	nucleus	55.04	55.98
Zm00001d011755_P001	Maize	plastid	36.55	34.8
Zm00001d043464_P001	Maize	plastid	35.29	33.33

Protein Annotations

EntrezGene:100193701	MapMan:35.1	UniProt:A0A1Q0YQ12	ProteinID:AFW63380.1	ProteinID:AQK54279.1	UniProt:B4FFZ9
EMBL:BT036037	EMBL:EU976364	EMBL:EU977033	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005811	InterPro:OBAP-like	PFAM:PF06884	PANTHER:PTHR31360	PANTHER:PTHR31360:SF0	UniParc:UPI00017B6EDB
EnsemblPlantsGene:Zm00001d051459	EnsemblPlants:Zm00001d051459_P001	EnsemblPlants:Zm00001d051459_T001	SEG:seg	:	:

Description

OBAP1AOil body-associated protein 1B

Coordinates

chr4:-:159425350..159426505

Molecular Weight (calculated)

26225.5 Da

IEP (calculated)

6.279

GRAVY (calculated)

-0.212

Length

238 amino acids

Sequence
(BLAST)

001: MASSCQNVEI PGKPTETGTA LLETATGTIQ GFAPLSQIHQ HLCAFHFYAD DMGRQVEAHH FCAHLNEDVR QCLIFDGPGA GARLIGVEYI VSETVFLTLP
101: DAEKPLWHTH EFEVKGGVLF MPGVPGVVER RDLEKVCKTY GKTIHFWQVD RGDALPLGLP QIMMVLTREG QLRQDLADCV EKKFGVSFQK ERENRAYMSG
201: PEHGIHPLAN ATGKGLRTEI REVDLPASTT AGAGRVFT

Best Arabidopsis Sequence Match ( AT1G05510.1 )
(BLAST)

001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V

Arabidopsis Description

OBAP1AOil body-associated protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.