Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03555 | Sorghum | plastid | 92.4 | 92.4 |
| Os01t0728700-01 | Rice | plastid | 84.8 | 84.8 |
| TraesCS3D01G283100.1 | Wheat | plastid | 83.2 | 83.2 |
| TraesCS3B01G316800.1 | Wheat | plastid | 82.4 | 82.4 |
| TraesCS3A01G283100.1 | Wheat | plastid | 82.0 | 82.0 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 82.8 | 80.23 |
| Zm00001d043464_P001 | Maize | plastid | 64.4 | 63.89 |
| VIT_10s0003g02040.t01 | Wine grape | cytosol | 60.8 | 62.04 |
| Solyc02g071760.2.1 | Tomato | extracellular | 56.4 | 58.75 |
| PGSC0003DMT400073143 | Potato | cytosol | 56.4 | 58.75 |
| Solyc02g071770.2.1 | Tomato | cytosol | 56.4 | 57.32 |
| PGSC0003DMT400073145 | Potato | nucleus | 35.6 | 57.05 |
| KRH21156 | Soybean | nucleus | 55.6 | 56.73 |
| Solyc03g005940.2.1 | Tomato | cytosol | 53.2 | 55.88 |
| KRH11089 | Soybean | plasma membrane | 41.6 | 55.03 |
| AT4G18920.1 | Thale cress | cytosol | 54.0 | 54.66 |
| CDX99410 | Canola | cytosol | 53.6 | 54.25 |
| AT5G45690.1 | Thale cress | nucleus | 53.6 | 54.25 |
| CDY39441 | Canola | cytosol | 52.8 | 53.66 |
| Bra025063.1-P | Field mustard | cytosol | 52.8 | 53.66 |
| CDY59324 | Canola | cytosol | 52.4 | 53.25 |
| CDY26320 | Canola | cytosol | 49.2 | 52.79 |
| CDX99847 | Canola | cytosol | 50.0 | 52.74 |
| Bra032330.1-P | Field mustard | cytosol | 50.0 | 52.74 |
| AT1G29680.1 | Thale cress | cytosol | 50.0 | 52.74 |
| Bra012566.1-P | Field mustard | cytosol | 43.2 | 48.21 |
| PGSC0003DMT400073144 | Potato | cytosol | 19.6 | 46.67 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 40.0 | 42.37 |
| Zm00001d051459_P001 | Maize | cytosol | 34.8 | 36.55 |
| CDY01566 | Canola | cytosol | 12.0 | 34.09 |
| Bra013362.1-P | Field mustard | cytosol | 53.6 | 27.74 |
| CDX78906 | Canola | cytosol | 53.6 | 27.63 |
Protein Annotations
| EMBL:EU976921 | EnsemblPlants:Zm00001d011755_P001 | EnsemblPlants:Zm00001d011755_T001 | EnsemblPlantsGene:Zm00001d011755 | EntrezGene:100286341 | InterPro:OBAP-like |
| PANTHER:PTHR31360 | PANTHER:PTHR31360:SF1 | PFAM:PF06884 | ProteinID:AFW83801.1 | ProteinID:AQK97936.1 | SEG:seg |
| UniParc:UPI000182FEC5 | UniProt:A0A1Q1C9T5 | UniProt:B6UI56 | MapMan:35.1 | : | : |
Description
OBAP2BSecreted protein
Coordinates
chr8:-:160797624..160798695
Molecular Weight (calculated)
27351.2 Da
IEP (calculated)
6.234
GRAVY (calculated)
-0.394
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDQNPAA TPASSGPAEP SPPGRPTAVS SRVLDMGAQL AQALKPVRQM KQHACSFALY AHDLHRQVEV HHFVARLNQD VLQCAVYDSD KPSARLIGVE
101: YIVSDTIFEG LAPDEQRLWH SHAYEVKAGL WTDVGVPEAL QSSEMASLAR TYGKFWCTWQ ADRGDALPLG APALMVSPQA AEPGRVRGEL VRGRDERYGI
201: DSSAGGLKAA RVEMDEPEWI NPNADYWRLH GKGFAVDVVP AEMKRHAPFP
101: YIVSDTIFEG LAPDEQRLWH SHAYEVKAGL WTDVGVPEAL QSSEMASLAR TYGKFWCTWQ ADRGDALPLG APALMVSPQA AEPGRVRGEL VRGRDERYGI
201: DSSAGGLKAA RVEMDEPEWI NPNADYWRLH GKGFAVDVVP AEMKRHAPFP
001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
Arabidopsis Description
OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.