Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- golgi 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_05s0062g00810.t01 | |
| VIT_17s0000g06020.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G29680.1 | VIT_05s0062g00810.t01 | AT2G31985.1 | 21798944 |
| AT1G29680.1 | VIT_17s0000g06020.t01 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071760.2.1 | Tomato | extracellular | 69.8 | 71.25 |
| PGSC0003DMT400073143 | Potato | cytosol | 69.39 | 70.83 |
| KRH21156 | Soybean | nucleus | 70.2 | 70.2 |
| KRH11089 | Soybean | plasma membrane | 52.65 | 68.25 |
| Solyc03g005940.2.1 | Tomato | cytosol | 66.12 | 68.07 |
| TraesCS3B01G316800.1 | Wheat | plastid | 65.71 | 64.4 |
| TraesCS3A01G283100.1 | Wheat | plastid | 65.31 | 64.0 |
| TraesCS3D01G283100.1 | Wheat | plastid | 64.9 | 63.6 |
| TraesCS3D01G272000.1 | Wheat | cytosol | 64.08 | 63.31 |
| TraesCS3B01G306300.1 | Wheat | cytosol | 63.67 | 62.9 |
| AT5G45690.1 | Thale cress | nucleus | 63.27 | 62.75 |
| Bra025063.1-P | Field mustard | cytosol | 62.86 | 62.6 |
| CDY39441 | Canola | cytosol | 62.86 | 62.6 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 63.27 | 62.5 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 65.71 | 62.4 |
| Os01t0728700-01 | Rice | plastid | 63.67 | 62.4 |
| AT4G18920.1 | Thale cress | cytosol | 62.86 | 62.35 |
| CDY59324 | Canola | cytosol | 62.45 | 62.2 |
| CDX99410 | Canola | cytosol | 62.04 | 61.54 |
| CDY26320 | Canola | cytosol | 58.37 | 61.37 |
| TraesCS3A01G272700.1 | Wheat | cytosol | 62.04 | 61.29 |
| Bra032330.1-P | Field mustard | cytosol | 59.18 | 61.18 |
| EES03609 | Sorghum | cytosol | 61.63 | 60.89 |
| EES03555 | Sorghum | plastid | 62.04 | 60.8 |
| Zm00001d011755_P001 | Maize | plastid | 62.04 | 60.8 |
| CDX99847 | Canola | cytosol | 58.78 | 60.76 |
| AT1G29680.1 | Thale cress | cytosol | 58.37 | 60.34 |
| Zm00001d043464_P001 | Maize | plastid | 62.04 | 60.32 |
| Bra012566.1-P | Field mustard | cytosol | 52.24 | 57.14 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 44.08 | 45.76 |
| CDY01566 | Canola | cytosol | 14.29 | 39.77 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 33.47 | 35.19 |
| Bra013362.1-P | Field mustard | cytosol | 62.86 | 31.88 |
| CDX78906 | Canola | cytosol | 62.86 | 31.75 |
Protein Annotations
| ArrayExpress:VIT_10s0003g02040 | EMBL:FN595992 | EnsemblPlants:VIT_10s0003g02040.t01 | EnsemblPlantsGene:VIT_10s0003g02040 | EntrezGene:100246418 | EntrezGene:LOC100246418 |
| InterPro:OBAP-like | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF1 | PFAM:PF06884 | ProteinID:CBI30756 | ProteinID:CBI30756.3 |
| RefSeq:XP_002263413 | RefSeq:XP_002263413.1 | RefSeq:XP_019078049.1 | TIGR:TC57576 | unigene:Vvi.7463 | UniParc:UPI00015CB787 |
| UniProt:D7TJT4 | wikigene:100246418 | wikigene:LOC100246418 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr10:+:3684611..3685828
Molecular Weight (calculated)
27955.5 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.554
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDKTPQG VPTSESHTPG TPMKAGQYVL DKGAQMLQSL KPVKQMKQHV CTFALYSHDM TRQIETHHYI TRLNQDFLQC AVYDSDNSDA HLIGIEYIVS
101: DRIFEALPPE EQKLWHSHAY EIKSGMWVNP GVPEMIQKPE LENIAKSYGK FWCTWQVDRG DRLPLGAPAL MMSPQAVNLG IVRPDLVQKR DDKYKISTDS
201: LKPLRLEIPE PEWINPNADY WKQSFGKGFA LDIEPTEMKL RAPFP
101: DRIFEALPPE EQKLWHSHAY EIKSGMWVNP GVPEMIQKPE LENIAKSYGK FWCTWQVDRG DRLPLGAPAL MMSPQAVNLG IVRPDLVQKR DDKYKISTDS
201: LKPLRLEIPE PEWINPNADY WKQSFGKGFA LDIEPTEMKL RAPFP
001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
Arabidopsis Description
OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.