Factsheet for HORVU3Hr1G069140.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G069360.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1
HORVU7Hr1G074020.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29680.1	HORVU5Hr1G069360.3	AT2G31985.1	21798944
AT1G29680.1	HORVU7Hr1G074020.2	AT2G31985.1	21798944
AT1G29680.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G29680.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G283100.1	Wheat	plastid	93.8	96.8
TraesCS3B01G316800.1	Wheat	plastid	92.64	95.6
TraesCS3A01G283100.1	Wheat	plastid	91.86	94.8
Os01t0728700-01	Rice	plastid	84.88	87.6
EES03555	Sorghum	plastid	81.4	84.0
Zm00001d011755_P001	Maize	plastid	80.23	82.8
VIT_10s0003g02040.t01	Wine grape	cytosol	62.4	65.71
HORVU3Hr1G071490.2	Barley	cytosol	62.4	64.92
PGSC0003DMT400073143	Potato	cytosol	56.98	61.25
KRH21156	Soybean	nucleus	58.14	61.22
Solyc02g071760.2.1	Tomato	extracellular	56.59	60.83
Solyc02g071770.2.1	Tomato	cytosol	56.59	59.35
KRH11089	Soybean	plasma membrane	43.41	59.26
PGSC0003DMT400073145	Potato	nucleus	35.66	58.97
Bra025063.1-P	Field mustard	cytosol	54.65	57.32
CDY39441	Canola	cytosol	54.65	57.32
Solyc03g005940.2.1	Tomato	cytosol	52.71	57.14
CDY59324	Canola	cytosol	54.26	56.91
Bra032330.1-P	Field mustard	cytosol	51.55	56.12
CDY26320	Canola	cytosol	50.39	55.79
CDX99847	Canola	cytosol	51.16	55.7
AT5G45690.1	Thale cress	nucleus	52.33	54.66
AT4G18920.1	Thale cress	cytosol	51.55	53.85
CDX99410	Canola	cytosol	51.16	53.44
AT1G29680.1	Thale cress	cytosol	48.45	52.74
Bra012566.1-P	Field mustard	cytosol	42.25	48.66
PGSC0003DMT400073144	Potato	cytosol	19.38	47.62
GSMUA_Achr9P05700_001	Banana	nucleus	40.7	44.49
CDY01566	Canola	cytosol	11.24	32.95
HORVU7Hr1G074020.2	Barley	cytosol	29.07	32.61
HORVU5Hr1G069360.3	Barley	cytosol	31.4	31.64
Bra013362.1-P	Field mustard	cytosol	51.55	27.54
CDX78906	Canola	cytosol	51.55	27.42

Protein Annotations

EnsemblPlants:HORVU3Hr1G069140.1	EnsemblPlantsGene:HORVU3Hr1G069140	InterPro:OBAP-like	PANTHER:PTHR31360	PANTHER:PTHR31360:SF1	PFAM:PF06884
SEG:seg	UniParc:UPI000B4671B9	UniProt:A0A287LIF4	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:524286202..524287200

Molecular Weight (calculated)

28698.0 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.564

Length

258 amino acids

Sequence
(BLAST)

001: NAREAMSSSD QNPEPTPASG TGGGGTAPPP PGRPTTVSSQ AIDMGAQVLQ PLKPVRQMKQ HACSFALYAH DMHRQLEVHH FVSRLNQDVL QCAVYDSDKP
101: SARLIGVEYI VSDDIFEALP PEEQKLWHSH AYEVKAGLWT DVGVPEMLQT SEMARMAKTY GKFWCTWQVD RGDRLPLGAP ALMMSPQAVE PGRVRAELVR
201: ARDERCKVDS SARGLKAQRV EMDEPEWINP NADYWRLHGK GFAVDVTPTD MKQHAPFP

Best Arabidopsis Sequence Match ( AT5G45690.1 )
(BLAST)

001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP

Arabidopsis Description

OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.