Factsheet for Bra013362.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99410	Canola	cytosol	49.9	97.57
CDX78906	Canola	cytosol	97.93	97.53
AT4G18920.1	Thale cress	cytosol	46.79	91.5
Bra012566.1-P	Field mustard	cytosol	39.13	84.38
Bra025063.1-P	Field mustard	cytosol	37.27	73.17
VIT_10s0003g02040.t01	Wine grape	cytosol	31.88	62.86
TraesCS3D01G272000.1	Wheat	cytosol	29.81	58.06
TraesCS3B01G306300.1	Wheat	cytosol	29.61	57.66
Solyc03g005940.2.1	Tomato	cytosol	28.36	57.56
KRH21156	Soybean	nucleus	29.19	57.55
Solyc02g071760.2.1	Tomato	extracellular	28.57	57.5
HORVU3Hr1G071490.2	Barley	cytosol	29.4	57.26
PGSC0003DMT400073143	Potato	cytosol	28.16	56.67
TraesCS3A01G272700.1	Wheat	cytosol	28.99	56.45
EES03609	Sorghum	cytosol	28.36	55.24
Bra032330.1-P	Field mustard	cytosol	26.5	54.01
EES03555	Sorghum	plastid	27.95	54.0
Zm00001d043464_P001	Maize	plastid	28.16	53.97
Os01t0728700-01	Rice	plastid	27.74	53.6
Zm00001d011755_P001	Maize	plastid	27.74	53.6
TraesCS3D01G283100.1	Wheat	plastid	27.33	52.8
TraesCS3B01G316800.1	Wheat	plastid	27.12	52.4
KRH11089	Soybean	plasma membrane	20.5	52.38
TraesCS3A01G283100.1	Wheat	plastid	26.71	51.6
HORVU3Hr1G069140.1	Barley	cytosol	27.54	51.55
GSMUA_Achr9P05700_001	Banana	nucleus	19.46	39.83
Bra015432.1-P	Field mustard	cytosol	18.43	36.93
Bra021765.1-P	Field mustard	cytosol	16.77	33.61

Protein Annotations

EnsemblPlants:Bra013362.1	EnsemblPlants:Bra013362.1-P	EnsemblPlantsGene:Bra013362	Gene3D:3.90.1140.10	InterPro:OBAP-like	InterPro:cNuc_Pdiesterase
PANTHER:PTHR31360	PANTHER:PTHR31360:SF1	PFAM:PF06884	PFAM:PF13563	SEG:seg	SUPFAM:SSF55144
UniParc:UPI000254644A	UniProt:M4DA52	MapMan:35.1	:	:	:

Description

AT4G18920 (E=1e-138) | unknown protein

Coordinates

chrA01:+:5199174..5202308

Molecular Weight (calculated)

54616.6 Da

IEP (calculated)

7.635

GRAVY (calculated)

-0.461

Length

483 amino acids

Sequence
(BLAST)

001: MASSDKVPVA CPASTGEGKE PMGDPTKTTT AMLDKGTAML QSMKPIKQMS LHVCSFACYS HDPGRQIEVH MYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFQSL SPDEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDRLPLGA PSLMVSPQDV SLGRIKPELV KKRDEEHGIS
201: TESLKPSREG ICGPEKKNLI ADYWVRFRTG FAIDVVETDM KRTAPFPSWE PSSDSRSQLI SQRGRDHELQ IVSDDCAHKK VCFLIQLQLR RLRLDCKVNG
301: IMEEVRKKKD VYSVWALPDD ETEPRFRKLM EALRSEFSGP RFDPHVTVVG ATSLTAEEAK KMFESACDGL KAYTATVDRV STGTFFYQCV FLLLKSTPEV
401: MKAGEHCKNH FKCSTTTPYM PHLSLLYAEL DEGKKKAREK AYTLDNSLDG LSFRLNRLAL CKTDTEDKTL ESWEKVAVCN LNP

Best Arabidopsis Sequence Match ( AT4G18920.1 )
(BLAST)

001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP

Arabidopsis Description

OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.