Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G18920.1 | Thale cress | cytosol | 83.93 | 76.11 |
| CDY01566 | Canola | cytosol | 25.89 | 65.91 |
| Bra025063.1-P | Field mustard | cytosol | 66.96 | 60.98 |
| VIT_10s0003g02040.t01 | Wine grape | cytosol | 57.14 | 52.24 |
| Solyc02g071760.2.1 | Tomato | extracellular | 52.68 | 49.17 |
| PGSC0003DMT400073143 | Potato | cytosol | 51.79 | 48.33 |
| Solyc03g005940.2.1 | Tomato | cytosol | 50.89 | 47.9 |
| TraesCS3D01G272000.1 | Wheat | cytosol | 52.23 | 47.18 |
| KRH21156 | Soybean | nucleus | 51.34 | 46.94 |
| TraesCS3B01G306300.1 | Wheat | cytosol | 51.34 | 46.37 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 51.34 | 46.37 |
| EES03609 | Sorghum | cytosol | 50.89 | 45.97 |
| Bra032330.1-P | Field mustard | cytosol | 48.21 | 45.57 |
| TraesCS3A01G272700.1 | Wheat | cytosol | 50.45 | 45.56 |
| KRH11089 | Soybean | plasma membrane | 37.95 | 44.97 |
| Zm00001d043464_P001 | Maize | plastid | 50.45 | 44.84 |
| Os01t0728700-01 | Rice | plastid | 48.66 | 43.6 |
| TraesCS3D01G283100.1 | Wheat | plastid | 48.66 | 43.6 |
| EES03555 | Sorghum | plastid | 48.21 | 43.2 |
| TraesCS3B01G316800.1 | Wheat | plastid | 48.21 | 43.2 |
| Zm00001d011755_P001 | Maize | plastid | 48.21 | 43.2 |
| TraesCS3A01G283100.1 | Wheat | plastid | 47.32 | 42.4 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 48.66 | 42.25 |
| Bra013362.1-P | Field mustard | cytosol | 84.38 | 39.13 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 33.93 | 32.2 |
| Bra015432.1-P | Field mustard | cytosol | 32.59 | 30.29 |
| Bra021765.1-P | Field mustard | cytosol | 32.14 | 29.88 |
Protein Annotations
Description
AT4G18920 (E=1e-065) | unknown protein
Coordinates
chrA03:+:23509075..23510207
Molecular Weight (calculated)
25303.8 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.415
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDKAPVA CPASIGECKE PMGDPTKTTT AILEKGTTTM QSMKPIKQMS LHMCSFACYS HDPGRQIEVH IYDHRVNHDF LQCAVYDSRI EYIVSEKLFE
101: SLSPEEQKLW HSHDYKIQMA LLVTPRIPEL VAKPELKNLA KSNGKFWCTW QIDRGDRLPL GVPSLMVSPQ DVNLGRIKPK LVKKRDEEHG ISTESLKPSR
201: EGICGPGKKI LVADYLRLMS LRQI
101: SLSPEEQKLW HSHDYKIQMA LLVTPRIPEL VAKPELKNLA KSNGKFWCTW QIDRGDRLPL GVPSLMVSPQ DVNLGRIKPK LVKKRDEEHG ISTESLKPSR
201: EGICGPGKKI LVADYLRLMS LRQI
001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
Arabidopsis Description
OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.