Factsheet for Os01t0728700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0747400-01
Os05t0569500-01
Os06t0226700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G29680.1	Os05t0569500-01	AT2G31985.1	21798944
AT1G29680.1	Os02t0747400-01	AT3G47620.1	21798944
AT1G29680.1	Os06t0226700-01	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G283100.1	Wheat	plastid	88.0	88.0
TraesCS3B01G316800.1	Wheat	plastid	87.2	87.2
TraesCS3A01G283100.1	Wheat	plastid	86.0	86.0
EES03555	Sorghum	plastid	85.6	85.6
HORVU3Hr1G069140.1	Barley	cytosol	87.6	84.88
Zm00001d011755_P001	Maize	plastid	84.8	84.8
VIT_10s0003g02040.t01	Wine grape	cytosol	62.4	63.67
Solyc02g071760.2.1	Tomato	extracellular	58.8	61.25
PGSC0003DMT400073143	Potato	cytosol	58.4	60.83
KRH21156	Soybean	nucleus	58.8	60.0
KRH11089	Soybean	plasma membrane	45.2	59.79
Solyc02g071770.2.1	Tomato	cytosol	57.2	58.13
Solyc03g005940.2.1	Tomato	cytosol	54.8	57.56
PGSC0003DMT400073145	Potato	nucleus	35.6	57.05
CDY39441	Canola	cytosol	54.8	55.69
Bra025063.1-P	Field mustard	cytosol	54.8	55.69
CDY59324	Canola	cytosol	54.4	55.28
AT5G45690.1	Thale cress	nucleus	54.4	55.06
Bra032330.1-P	Field mustard	cytosol	52.0	54.85
CDY26320	Canola	cytosol	50.8	54.51
CDX99847	Canola	cytosol	51.6	54.43
AT4G18920.1	Thale cress	cytosol	53.6	54.25
CDX99410	Canola	cytosol	53.6	54.25
AT1G29680.1	Thale cress	cytosol	50.4	53.16
Bra012566.1-P	Field mustard	cytosol	43.6	48.66
PGSC0003DMT400073144	Potato	cytosol	20.0	47.62
GSMUA_Achr9P05700_001	Banana	nucleus	41.2	43.64
CDY01566	Canola	cytosol	11.6	32.95
Os05t0569500-01	Rice	cytosol, plastid	33.2	32.3
Bra013362.1-P	Field mustard	cytosol	53.6	27.74
CDX78906	Canola	cytosol	53.6	27.63

Protein Annotations

EMBL:AK108000	EnsemblPlants:Os01t0728700-01	EnsemblPlantsGene:Os01g0728700	EntrezGene:4323923	InterPro:OBAP-like	PANTHER:PTHR31360
PANTHER:PTHR31360:SF1	PFAM:PF06884	ProteinID:BAB21159.1	ProteinID:BAB63510.1	ProteinID:BAF06045.1	ProteinID:BAS74155.1
RefSeq:XP_015634975.1	UniParc:UPI000009CB7C	UniProt:Q9AX20	MapMan:35.1	:	:

Description

Protein of unknown function DUF1264 family protein. (Os01t0728700-01)

Coordinates

chr1:-:30386907..30387873

Molecular Weight (calculated)

27571.6 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.434

Length

250 amino acids

Sequence
(BLAST)

001: MSSSDQNPSP TPASGTGTSV PPPGRATTVS SQLLDMGAQA VQALKPVRQM KQHACSFALY AHDLSRQVEV HHFVSRLNQD VLQCAVYDSD KPSARLIGVE
101: YIVSDAIFES LPPEEQKLWH SHAYEVKAGL WTDVGVPEPL QSSEMARMAK TYGKLWCTWQ VDRGDALPLG APALMVSPQA VEPGRVRAEL VHGRDERYKI
201: DSSAQGLKGA RVEMDEPEWI NPNADYWRLH GKGFAIDVTA TEMKRHAPFP

Best Arabidopsis Sequence Match ( AT5G45690.1 )
(BLAST)

001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP

Arabidopsis Description

OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.