Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071770.2.1 | Tomato | cytosol | 83.81 | 35.77 |
| PGSC0003DMT400073143 | Potato | cytosol | 49.52 | 21.67 |
| TraesCS3D01G272000.1 | Wheat | cytosol | 47.62 | 20.16 |
| TraesCS3B01G306300.1 | Wheat | cytosol | 47.62 | 20.16 |
| Os01t0728700-01 | Rice | plastid | 47.62 | 20.0 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 46.67 | 19.76 |
| Zm00001d011755_P001 | Maize | plastid | 46.67 | 19.6 |
| TraesCS3D01G283100.1 | Wheat | plastid | 46.67 | 19.6 |
| TraesCS3B01G316800.1 | Wheat | plastid | 46.67 | 19.6 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 47.62 | 19.38 |
| TraesCS3A01G272700.1 | Wheat | cytosol | 45.71 | 19.35 |
| TraesCS3A01G283100.1 | Wheat | plastid | 45.71 | 19.2 |
| Zm00001d043464_P001 | Maize | plastid | 45.71 | 19.05 |
| EES03609 | Sorghum | cytosol | 43.81 | 18.55 |
| EES03555 | Sorghum | plastid | 43.81 | 18.4 |
| PGSC0003DMT400016814 | Potato | cytosol | 25.71 | 11.34 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 16.19 | 7.2 |
| PGSC0003DMT400073145 | Potato | nucleus | 5.71 | 3.85 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400073144 | EnsemblPlantsGene:PGSC0003DMG400028446 | InterPro:OBAP-like | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF1 | PFAM:PF06884 |
| PGSC:PGSC0003DMG400028446 | UniParc:UPI000295FB14 | UniProt:M1CRL6 | MapMan:35.1 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400028446]
Coordinates
chr2:-:31066777..31067413
Molecular Weight (calculated)
11273.8 Da
IEP (calculated)
8.693
GRAVY (calculated)
-0.321
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCELLPDIG KISYCGGGSG DRLPLGAPAL MMSPQGVNLG MVAPELVKKR DGKYGISSKD LEKTRADIAG PKTTMNPYAN YWMQTGKGFA IDMELTDMKK
101: TAPFP
101: TAPFP
001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
Arabidopsis Description
OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.