Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G283100.1 | Wheat | plastid | 97.6 | 97.6 |
TraesCS3A01G283100.1 | Wheat | plastid | 95.2 | 95.2 |
HORVU3Hr1G069140.1 | Barley | cytosol | 95.6 | 92.64 |
Os01t0728700-01 | Rice | plastid | 87.2 | 87.2 |
EES03555 | Sorghum | plastid | 83.6 | 83.6 |
Zm00001d011755_P001 | Maize | plastid | 82.4 | 82.4 |
VIT_10s0003g02040.t01 | Wine grape | cytosol | 64.4 | 65.71 |
TraesCS3B01G306300.1 | Wheat | cytosol | 64.0 | 64.52 |
PGSC0003DMT400073143 | Potato | cytosol | 58.8 | 61.25 |
Solyc02g071760.2.1 | Tomato | extracellular | 58.4 | 60.83 |
KRH21156 | Soybean | nucleus | 59.2 | 60.41 |
PGSC0003DMT400073145 | Potato | nucleus | 37.6 | 60.26 |
Solyc02g071770.2.1 | Tomato | cytosol | 58.8 | 59.76 |
KRH11089 | Soybean | plasma membrane | 44.4 | 58.73 |
Solyc03g005940.2.1 | Tomato | cytosol | 54.8 | 57.56 |
Bra025063.1-P | Field mustard | cytosol | 55.2 | 56.1 |
CDY39441 | Canola | cytosol | 55.2 | 56.1 |
Bra032330.1-P | Field mustard | cytosol | 52.8 | 55.7 |
CDY59324 | Canola | cytosol | 54.8 | 55.69 |
CDY26320 | Canola | cytosol | 51.6 | 55.36 |
CDX99847 | Canola | cytosol | 52.4 | 55.27 |
AT5G45690.1 | Thale cress | nucleus | 54.0 | 54.66 |
AT1G29680.1 | Thale cress | cytosol | 50.4 | 53.16 |
AT4G18920.1 | Thale cress | cytosol | 52.4 | 53.04 |
CDX99410 | Canola | cytosol | 52.0 | 52.63 |
Bra012566.1-P | Field mustard | cytosol | 43.2 | 48.21 |
PGSC0003DMT400073144 | Potato | cytosol | 19.6 | 46.67 |
GSMUA_Achr9P05700_001 | Banana | nucleus | 41.6 | 44.07 |
TraesCS5B01G241900.1 | Wheat | cytosol | 33.6 | 35.59 |
CDY01566 | Canola | cytosol | 11.2 | 31.82 |
Bra013362.1-P | Field mustard | cytosol | 52.4 | 27.12 |
CDX78906 | Canola | cytosol | 52.4 | 27.01 |
Protein Annotations
EnsemblPlants:TraesCS3B01G316800.1 | EnsemblPlantsGene:TraesCS3B01G316800 | InterPro:OBAP-like | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF1 | PFAM:PF06884 |
SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:508527765..508528582
Molecular Weight (calculated)
27974.3 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.538
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSDQNPAP TPTSGTGGTA PPPGRPTTVS SQVIDMGAQV LQPLKPVRQM KQHACSFALY AHDIHRQLEA HHFVSRLNQD VLQCAVYDSD KPSARLIGVE
101: YIVSDKIFED LPPEEQKLWH SHAYEVKAGL WTDVGVPEML QTSEMARMAK TYGKFWCTWQ VDRGDRLPLG APALMMSPQA VEPGRVRAEL VRARDERCKV
201: DSSARGLKAQ RVEMDEPEWI NPNADYWRLH GKGFAVDVTT TEMKQHAPFP
101: YIVSDKIFED LPPEEQKLWH SHAYEVKAGL WTDVGVPEML QTSEMARMAK TYGKFWCTWQ VDRGDRLPLG APALMMSPQA VEPGRVRAEL VRARDERCKV
201: DSSARGLKAQ RVEMDEPEWI NPNADYWRLH GKGFAVDVTT TEMKQHAPFP
001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP
Arabidopsis Description
OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.