CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025063.1-P	Field mustard	cytosol	98.78	98.78
CDY39441	Canola	cytosol	98.78	98.78
AT5G45690.1	Thale cress	nucleus	85.77	85.43
CDX99410	Canola	cytosol	73.17	72.87
VIT_10s0003g02040.t01	Wine grape	cytosol	62.2	62.45
Solyc03g005940.2.1	Tomato	cytosol	59.35	61.34
Solyc02g071760.2.1	Tomato	extracellular	58.13	59.58
KRH21156	Soybean	nucleus	58.94	59.18
PGSC0003DMT400073143	Potato	cytosol	57.32	58.75
TraesCS3D01G272000.1	Wheat	cytosol	58.94	58.47
TraesCS3B01G306300.1	Wheat	cytosol	58.54	58.06
HORVU3Hr1G071490.2	Barley	cytosol	57.72	57.26
CDY26320	Canola	cytosol	54.06	57.08
TraesCS3A01G272700.1	Wheat	cytosol	57.32	56.85
CDX99847	Canola	cytosol	54.47	56.54
Zm00001d043464_P001	Maize	plastid	56.91	55.56
TraesCS3D01G283100.1	Wheat	plastid	56.1	55.2
KRH11089	Soybean	plasma membrane	42.28	55.03
TraesCS3B01G316800.1	Wheat	plastid	55.69	54.8
Os01t0728700-01	Rice	plastid	55.28	54.4
TraesCS3A01G283100.1	Wheat	plastid	55.28	54.4
HORVU3Hr1G069140.1	Barley	cytosol	56.91	54.26
EES03609	Sorghum	cytosol	54.47	54.03
Zm00001d011755_P001	Maize	plastid	53.25	52.4
EES03555	Sorghum	plastid	52.85	52.0
CDY01566	Canola	cytosol	16.26	45.45
GSMUA_Achr9P05700_001	Banana	nucleus	38.21	39.83
CDY47277	Canola	cytosol	38.21	39.0
CDY10117	Canola	cytosol	37.4	38.17
CDX78906	Canola	cytosol	73.17	37.11
CDY66704	Canola	cytosol	34.15	34.85
CDY68306	Canola	cytosol	34.15	34.85

Protein Annotations

EnsemblPlants:CDY59324	EnsemblPlantsGene:GSBRNA2T00025880001	InterPro:OBAP-like	PANTHER:PTHR31360	PANTHER:PTHR31360:SF1	PFAM:PF06884
ProteinID:CDY59324	ProteinID:CDY59324.1	SEG:seg	UniParc:UPI0004EC673B	UniProt:A0A078J7H4	MapMan:35.1

Description

BnaCnng34690DBnaCnng34690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J7H4]

Coordinates

chrLK033750:+:34127..35676

Molecular Weight (calculated)

27754.4 Da

IEP (calculated)

6.234

GRAVY (calculated)

-0.435

Length

246 amino acids

Sequence
(BLAST)

001: MASSDELPGP YPARDGGDIP PGDPTTMKTM MIDKGAAMLQ SFKPIKQMSL HMCSFACYGH DPSRQIEVHF YVHRVNEDFL QCAVYDCDSA KTHLIGIEYI
101: VSERLFESLS SEEQKLWHSH DYEIQTGLLM TPRVPELVAK PELQNIAKTY GKFWCTWQTD RGDKLPLGAP ALMMSPQDVN IGKIKPGLLK KRDDEYGIST
201: ESLKTSRAEI VGLERKNPMA DYWVHHGKGF AVDIIETDMK KCAPFP

Best Arabidopsis Sequence Match ( AT5G45690.1 )
(BLAST)

001: MASSDERPGA YPARDGSENL PPGDPKTMKT VVMDKGAAMM QSLKPIKQMS LHLCSFACYG HDPSRQIEVN FYVHRLNQDF LQCAVYDCDS SKPHLIGIEY
101: IVSERLFESL DPEEQKLWHS HDYEIQTGLL VTPRVPELVA KTELENIAKT YGKFWCTWQT DRGDKLPLGA PSLMMSPQDV NMGKIKPGLL KKRDDEYGIS
201: TESLKTSRVG IMGPEKKNSM ADYWVHHGKG LAVDIIETEM QKLAPFP

Arabidopsis Description

OBAP2AOil body-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q941A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.