Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012566.1-P | Field mustard | cytosol | 65.91 | 25.89 |
| CDX99410 | Canola | cytosol | 61.36 | 21.86 |
| AT4G18920.1 | Thale cress | cytosol | 56.82 | 20.24 |
| CDY39441 | Canola | cytosol | 45.45 | 16.26 |
| CDY59324 | Canola | cytosol | 45.45 | 16.26 |
| TraesCS3A01G272700.1 | Wheat | cytosol | 42.05 | 14.92 |
| VIT_10s0003g02040.t01 | Wine grape | cytosol | 39.77 | 14.29 |
| TraesCS3D01G272000.1 | Wheat | cytosol | 39.77 | 14.11 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 38.64 | 13.71 |
| Solyc02g071760.2.1 | Tomato | extracellular | 36.36 | 13.33 |
| PGSC0003DMT400073143 | Potato | cytosol | 36.36 | 13.33 |
| TraesCS3B01G306300.1 | Wheat | cytosol | 37.5 | 13.31 |
| KRH21156 | Soybean | nucleus | 35.23 | 12.65 |
| Solyc03g005940.2.1 | Tomato | cytosol | 34.09 | 12.61 |
| EES03609 | Sorghum | cytosol | 35.23 | 12.5 |
| EES03555 | Sorghum | plastid | 35.23 | 12.4 |
| Zm00001d043464_P001 | Maize | plastid | 35.23 | 12.3 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 32.95 | 12.29 |
| Zm00001d011755_P001 | Maize | plastid | 34.09 | 12.0 |
| Os01t0728700-01 | Rice | plastid | 32.95 | 11.6 |
| TraesCS3D01G283100.1 | Wheat | plastid | 32.95 | 11.6 |
| CDX78906 | Canola | cytosol | 62.5 | 11.34 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 32.95 | 11.24 |
| TraesCS3A01G283100.1 | Wheat | plastid | 31.82 | 11.2 |
| TraesCS3B01G316800.1 | Wheat | plastid | 31.82 | 11.2 |
| CDX99847 | Canola | cytosol | 26.14 | 9.7 |
| CDY10117 | Canola | cytosol | 26.14 | 9.54 |
| CDY26320 | Canola | cytosol | 25.0 | 9.44 |
| CDY47277 | Canola | cytosol | 25.0 | 9.13 |
| CDY68306 | Canola | cytosol | 23.86 | 8.71 |
| CDY66704 | Canola | cytosol | 23.86 | 8.71 |
| KRH11089 | Soybean | plasma membrane | 12.5 | 5.82 |
Protein Annotations
| EnsemblPlants:CDY01566 | EnsemblPlantsGene:GSBRNA2T00112606001 | ProteinID:CDY01566 | ProteinID:CDY01566.1 | UniParc:UPI0004EF2213 | MapMan:35.1 |
Description
BnaC07g35560D
Coordinates
chrLK031927:+:700437..701010
Molecular Weight (calculated)
9867.6 Da
IEP (calculated)
9.906
GRAVY (calculated)
-0.018
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MASSDKAPVA CPAGIGECKE PMGDPTKTTT AILEKGTAMM QSMKPIKQMS LHILSPMCCL RIQDRIYSVR EVIRKPLIPM IMRSRWLF
001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
Arabidopsis Description
OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.