CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013362.1-P	Field mustard	cytosol	97.53	97.93
CDX99410	Canola	cytosol	49.69	97.57
AT4G18920.1	Thale cress	cytosol	46.6	91.5
CDY39441	Canola	cytosol	37.11	73.17
CDY59324	Canola	cytosol	37.11	73.17
VIT_10s0003g02040.t01	Wine grape	cytosol	31.75	62.86
CDY01566	Canola	cytosol	11.34	62.5
TraesCS3D01G272000.1	Wheat	cytosol	29.69	58.06
TraesCS3B01G306300.1	Wheat	cytosol	29.48	57.66
Solyc03g005940.2.1	Tomato	cytosol	28.25	57.56
KRH21156	Soybean	nucleus	29.07	57.55
Solyc02g071760.2.1	Tomato	extracellular	28.45	57.5
HORVU3Hr1G071490.2	Barley	cytosol	29.28	57.26
PGSC0003DMT400073143	Potato	cytosol	28.04	56.67
TraesCS3A01G272700.1	Wheat	cytosol	28.87	56.45
EES03609	Sorghum	cytosol	28.25	55.24
CDY26320	Canola	cytosol	26.19	54.51
CDX99847	Canola	cytosol	26.6	54.43
EES03555	Sorghum	plastid	27.84	54.0
Zm00001d043464_P001	Maize	plastid	28.04	53.97
Os01t0728700-01	Rice	plastid	27.63	53.6
Zm00001d011755_P001	Maize	plastid	27.63	53.6
TraesCS3D01G283100.1	Wheat	plastid	27.22	52.8
TraesCS3B01G316800.1	Wheat	plastid	27.01	52.4
KRH11089	Soybean	plasma membrane	20.41	52.38
TraesCS3A01G283100.1	Wheat	plastid	26.6	51.6
HORVU3Hr1G069140.1	Barley	cytosol	27.42	51.55
GSMUA_Achr9P05700_001	Banana	nucleus	19.59	40.25
CDY10117	Canola	cytosol	18.35	36.93
CDY47277	Canola	cytosol	18.35	36.93
CDY66704	Canola	cytosol	16.91	34.02
CDY68306	Canola	cytosol	16.7	33.61

Protein Annotations

EnsemblPlants:CDX78906	EnsemblPlantsGene:GSBRNA2T00131393001	Gene3D:3.90.1140.10	GO:A0A078CNV7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004112	GO:GO:0016787	InterPro:Cyclic-nucl_3Pdiesterase	InterPro:OBAP-like	InterPro:cNuc_Pdiesterase	PANTHER:PTHR31360
PANTHER:PTHR31360:SF1	PFAM:PF06884	PFAM:PF07823	ProteinID:CDX78906	ProteinID:CDX78906.1	SUPFAM:SSF55144
UniParc:UPI0004EDCF9E	MapMan:35.1	:	:	:	:

Description

BnaA01g09730D

Coordinates

chrLK031816:+:741978..745171

Molecular Weight (calculated)

54560.3 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.456

Length

485 amino acids

Sequence
(BLAST)

001: MASSDKVPVA CPASTGEGKE PMGDPTKTTT AMLDKGTAML QSMKPIKQMS LHVCSFACYS HDPGRQIEVH MYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFQSL SPDEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDRLPLGA PSLMVSPQDV SLGRIKPELV KKRDEEHGIS
201: TESLKPSREG ICGPEKKNLI ADYWVRFRTG FAIDVVETDM KRTAPFPSWE PSSDSGSQLI SQRGRDHELQ IVSDDCAHKK VCFFDSISVK SRLRLDCKVN
301: GIMEEVKKKK DVYSVWALPD DETEPRFRKL MEALRSEFSG PRFDPHVTVV GATSLTAEEA KKMFESACDG LKAYTATVDR VSTGTFFYQC VFLLLKSTPE
401: VMKAGEHCKN HFKCSTTTPY MPHLSLLYAE LDEEGKKKAR EKAYTLDNSL DGLSFRLNRL ALCKTDTEDK TLESWEKVAV CNLGP

Best Arabidopsis Sequence Match ( AT4G18920.1 )
(BLAST)

001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP

Arabidopsis Description

OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.