Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99410 | Canola | cytosol | 91.5 | 91.5 |
| Bra012566.1-P | Field mustard | cytosol | 76.11 | 83.93 |
| AT5G45690.1 | Thale cress | nucleus | 72.47 | 72.47 |
| VIT_10s0003g02040.t01 | Wine grape | cytosol | 62.35 | 62.86 |
| Solyc03g005940.2.1 | Tomato | cytosol | 55.87 | 57.98 |
| Solyc02g071760.2.1 | Tomato | extracellular | 56.28 | 57.92 |
| PGSC0003DMT400073143 | Potato | cytosol | 55.47 | 57.08 |
| CDY01566 | Canola | cytosol | 20.24 | 56.82 |
| KRH21156 | Soybean | nucleus | 56.28 | 56.73 |
| TraesCS3D01G272000.1 | Wheat | cytosol | 56.68 | 56.45 |
| TraesCS3B01G306300.1 | Wheat | cytosol | 56.68 | 56.45 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 55.87 | 55.65 |
| TraesCS3A01G272700.1 | Wheat | cytosol | 55.06 | 54.84 |
| EES03609 | Sorghum | cytosol | 54.66 | 54.44 |
| EES03555 | Sorghum | plastid | 54.66 | 54.0 |
| Zm00001d011755_P001 | Maize | plastid | 54.66 | 54.0 |
| Os01t0728700-01 | Rice | plastid | 54.25 | 53.6 |
| Zm00001d043464_P001 | Maize | plastid | 54.66 | 53.57 |
| KRH11089 | Soybean | plasma membrane | 40.49 | 52.91 |
| TraesCS3D01G283100.1 | Wheat | plastid | 53.44 | 52.8 |
| AT1G29680.1 | Thale cress | cytosol | 50.61 | 52.74 |
| TraesCS3B01G316800.1 | Wheat | plastid | 53.04 | 52.4 |
| TraesCS3A01G283100.1 | Wheat | plastid | 52.23 | 51.6 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 53.85 | 51.55 |
| Bra013362.1-P | Field mustard | cytosol | 91.5 | 46.79 |
| CDX78906 | Canola | cytosol | 91.5 | 46.6 |
| GSMUA_Achr9P05700_001 | Banana | nucleus | 35.63 | 37.29 |
| AT1G05510.1 | Thale cress | cytosol | 34.01 | 34.85 |
| AT2G31985.1 | Thale cress | cytosol | 34.01 | 34.85 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827627 | UniProt:A0A178V434 | ProteinID:AEE84107.1 | ArrayExpress:AT4G18920 | EnsemblPlantsGene:AT4G18920 |
| RefSeq:AT4G18920 | TAIR:AT4G18920 | RefSeq:AT4G18920-TAIR-G | EnsemblPlants:AT4G18920.1 | TAIR:AT4G18920.1 | EMBL:AY088641 |
| Unigene:At.32856 | ProteinID:CAA16749.1 | ProteinID:CAB78894.1 | EMBL:DQ446850 | EMBL:DQ653208 | GO:GO:0008150 |
| RefSeq:NP_567567.1 | ProteinID:OAP01080.1 | InterPro:OBAP-like | PFAM:PF06884 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF1 | UniProt:Q1PE68 |
| UniParc:UPI0000162ABD | : | : | : | : | : |
Description
OBAP2BOil body-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:Q1PE68]
Coordinates
chr4:+:10368755..10370281
Molecular Weight (calculated)
27749.5 Da
IEP (calculated)
7.861
GRAVY (calculated)
-0.443
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSDKVPVA CPASSGDGKE PMGNPTKTTT AMLEKGTAMM QSMKPIRQMS LHVCSFACYS HDPGRQIEVH IYGHRVNQDF LQCAVYDSNS SKAHLIGIEY
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
101: IVSEKLFESL SPEEQKLWHS HDYEIQMALL VTPRVPELVA KPELKNLAKS YGKFWCTWQI DRGDKLPLGV PSLMVSPQDV NLGRIKPELV KKRDEEHGIS
201: TESLKPSRDG ICGPEKKNLV ADYWVRFRKG FALDVVETDM KRTAPFP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.