Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10117 | Canola | cytosol | 94.19 | 94.19 |
| Bra015432.1-P | Field mustard | cytosol | 89.63 | 89.63 |
| CDY47277 | Canola | cytosol | 89.63 | 89.63 |
| AT2G31985.1 | Thale cress | cytosol | 82.16 | 82.16 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 68.05 | 70.39 |
| Solyc09g098120.2.1 | Tomato | cytosol | 68.46 | 69.33 |
| PGSC0003DMT400016814 | Potato | cytosol | 68.05 | 68.91 |
| TraesCS5A01G239600.1 | Wheat | cytosol | 61.41 | 66.37 |
| TraesCS5D01G250600.1 | Wheat | cytosol | 64.73 | 66.1 |
| TraesCS5B01G241900.1 | Wheat | cytosol | 64.32 | 65.68 |
| TraesCS5A01G243900.1 | Wheat | cytosol | 64.32 | 65.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.24 | 64.1 |
| EES05730 | Sorghum | cytosol | 63.07 | 63.87 |
| Zm00001d051459_P001 | Maize | cytosol | 61.83 | 62.6 |
| KRH31541 | Soybean | nucleus | 60.58 | 62.39 |
| Os05t0569500-01 | Rice | cytosol, plastid | 55.19 | 51.75 |
| HORVU5Hr1G069360.3 | Barley | cytosol | 53.94 | 50.78 |
| HORVU7Hr1G074020.2 | Barley | cytosol | 46.06 | 48.26 |
| AT4G18920.1 | Thale cress | cytosol | 34.85 | 34.01 |
| AT5G45690.1 | Thale cress | nucleus | 34.02 | 33.2 |
| AT1G29680.1 | Thale cress | cytosol | 31.54 | 32.07 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837053 | UniProt:A0A178WID0 | ProteinID:AAF79727.1 | ProteinID:AEE27847.1 | EMBL:AK226452 |
| ArrayExpress:AT1G05510 | EnsemblPlantsGene:AT1G05510 | RefSeq:AT1G05510 | TAIR:AT1G05510 | RefSeq:AT1G05510-TAIR-G | EnsemblPlants:AT1G05510.1 |
| TAIR:AT1G05510.1 | EMBL:AY070405 | EMBL:AY096580 | Unigene:At.28368 | GO:GO:0000003 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005811 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0010344 | GO:GO:0019915 |
| RefSeq:NP_172042.1 | ProteinID:OAP17223.1 | InterPro:OBAP-like | PFAM:PF06884 | PO:PO:0001170 | PO:PO:0007131 |
| PO:PO:0009010 | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF0 | UniProt:Q9ZVY7 | UniParc:UPI00000A573D | SEG:seg |
Description
OBAP1AOil body-associated protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVY7]
Coordinates
chr1:+:1629446..1630863
Molecular Weight (calculated)
27294.9 Da
IEP (calculated)
6.705
GRAVY (calculated)
-0.410
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.