Factsheet for Os05t0569500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0728700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05510.1	Os01t0728700-01	AT1G29680.1	21798944
AT2G31985.1	Os01t0728700-01	AT1G29680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G243900.1	Wheat	cytosol	64.98	70.76
TraesCS5D01G250600.1	Wheat	cytosol	64.2	69.92
Zm00001d051459_P001	Maize	cytosol	64.59	69.75
TraesCS5B01G241900.1	Wheat	cytosol	63.81	69.49
EES05730	Sorghum	cytosol	64.2	69.33
TraesCS5A01G239600.1	Wheat	cytosol	59.14	68.16
HORVU5Hr1G069360.3	Barley	cytosol	63.42	63.67
VIT_05s0062g00810.t01	Wine grape	cytosol	55.64	61.37
GSMUA_AchrUn_...	Banana	cytosol	54.09	59.4
PGSC0003DMT400016814	Potato	cytosol	52.53	56.72
Solyc09g098120.2.1	Tomato	cytosol	52.53	56.72
CDY10117	Canola	cytosol	52.14	55.6
AT1G05510.1	Thale cress	cytosol	51.75	55.19
CDY47277	Canola	cytosol	51.75	55.19
Bra015432.1-P	Field mustard	cytosol	51.75	55.19
CDY68306	Canola	cytosol	50.58	53.94
Bra021765.1-P	Field mustard	cytosol	50.58	53.94
CDY66704	Canola	cytosol	50.19	53.53
AT2G31985.1	Thale cress	cytosol	49.81	53.11
KRH31541	Soybean	nucleus	45.14	49.57
Os01t0728700-01	Rice	plastid	32.3	33.2

Protein Annotations

EMBL:AK073481	EnsemblPlants:Os05t0569500-01	EnsemblPlantsGene:Os05g0569500	InterPro:OBAP-like	PANTHER:PTHR31360	PANTHER:PTHR31360:SF0
PFAM:PF06884	ProteinID:AAT93933.1	ProteinID:BAS95409.1	SEG:seg	UniParc:UPI000040363D	UniProt:Q6AUN1
MapMan:35.1	:	:	:	:	:

Description

Similar to Embryo-specific protein. (Os05t0569500-01)

Coordinates

chr5:+:28346743..28347863

Molecular Weight (calculated)

28569.3 Da

IEP (calculated)

6.443

GRAVY (calculated)

-0.255

Length

257 amino acids

Sequence
(BLAST)

001: MAASCHEVEV PGKPTETGTA LLEAATGSIQ GFGPVNQIHQ HLCAFHFYAD DMTRQVEAHH FCAHLNEDMR QCLIFDGPDA GARLIGVEYI VAEPLFLTLP
101: DDEKPLWHTH EFEVKGGVLF MPGVPGVVER RDLERVCKTY GKTIHFWQVD RGDALPLGLP QIMMALTRDG QLRQELAKCT CKIIHVQLCF FLQSIVSRHS
201: LTTCVGDWCV HCRCGGEVQR VVRQGEGEPS VHERPGSRHP PAGECRRQGL EDRSPGG

Best Arabidopsis Sequence Match ( AT1G05510.1 )
(BLAST)

001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V

Arabidopsis Description

OBAP1AOil body-associated protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.