CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES03555
EES03609

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05510.1	EES03555	AT1G29680.1	21798944
AT1G05510.1	EES03609	AT1G29680.1	21798944
AT2G31985.1	EES03555	AT1G29680.1	21798944
AT2G31985.1	EES03609	AT1G29680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051459_P001	Maize	cytosol	94.96	94.96
TraesCS5D01G250600.1	Wheat	cytosol	86.13	86.86
TraesCS5A01G243900.1	Wheat	cytosol	86.13	86.86
TraesCS5A01G239600.1	Wheat	cytosol	81.09	86.55
TraesCS5B01G241900.1	Wheat	cytosol	85.29	86.02
VIT_05s0062g00810.t01	Wine grape	cytosol	68.49	69.96
PGSC0003DMT400016814	Potato	cytosol	67.65	67.65
Solyc09g098120.2.1	Tomato	cytosol	66.81	66.81
GSMUA_AchrUn_...	Banana	cytosol	65.13	66.24
HORVU5Hr1G069360.3	Barley	cytosol	70.59	65.62
Os05t0569500-01	Rice	cytosol, plastid	69.33	64.2
CDY68306	Canola	cytosol	64.71	63.9
Bra021765.1-P	Field mustard	cytosol	64.71	63.9
CDY66704	Canola	cytosol	64.29	63.49
AT1G05510.1	Thale cress	cytosol	63.87	63.07
AT2G31985.1	Thale cress	cytosol	63.45	62.66
CDY47277	Canola	cytosol	63.03	62.24
CDY10117	Canola	cytosol	63.03	62.24
Bra015432.1-P	Field mustard	cytosol	63.03	62.24
KRH31541	Soybean	nucleus	55.46	56.41
EES03555	Sorghum	plastid	35.71	34.0
EES03609	Sorghum	cytosol	33.61	32.26

Protein Annotations

EnsemblPlants:EES05730	EnsemblPlantsGene:SORBI_3004G281700	EntrezGene:8073213	InterPro:OBAP-like	PANTHER:PTHR31360	PANTHER:PTHR31360:SF0
PFAM:PF06884	ProteinID:EES05730	ProteinID:EES05730.1	RefSeq:XP_002452754.1	SEG:seg	unigene:Sbi.6604
UniParc:UPI0001A85EE6	UniProt:C5Y0Y5	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:62397317..62398331

Molecular Weight (calculated)

26147.3 Da

IEP (calculated)

6.312

GRAVY (calculated)

-0.205

Length

238 amino acids

Sequence
(BLAST)

001: MASSCHHVDV PGKPTETGTA LLETATGTIQ GFAPLSQIHQ HLCAFHFYAD DMGRQVEAHH FCAHLNEDVR QCLIFDGPGA GARLIGVEYI VSEAVFLTLP
101: DGEKPLWHTH EFEVKGGFLF MPGVPGVVER RDLEKVCKTY GKTIHFWQVD RGDALPLGIP QIMMALTREG QLQQDLADCV EKKFGVSFQK ERENRAYMSG
201: PEHGIHPLAN AAGKGLRTEI REVDIPASTT AGAGRVFT

Best Arabidopsis Sequence Match ( AT1G05510.1 )
(BLAST)

001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V

Arabidopsis Description

OBAP1AOil body-associated protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.