Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra032330.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G31985.1 | Bra032330.1-P | AT1G29680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68306 | Canola | cytosol | 100.0 | 100.0 |
| CDY66704 | Canola | cytosol | 99.59 | 99.59 |
| AT2G31985.1 | Thale cress | cytosol | 91.7 | 91.7 |
| Bra015432.1-P | Field mustard | cytosol | 79.67 | 79.67 |
| TraesCS5A01G239600.1 | Wheat | cytosol | 61.83 | 66.82 |
| TraesCS5D01G250600.1 | Wheat | cytosol | 65.15 | 66.53 |
| TraesCS5A01G243900.1 | Wheat | cytosol | 64.73 | 66.1 |
| TraesCS5B01G241900.1 | Wheat | cytosol | 64.73 | 66.1 |
| Solyc09g098120.2.1 | Tomato | cytosol | 65.15 | 65.97 |
| PGSC0003DMT400016814 | Potato | cytosol | 64.73 | 65.55 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 63.07 | 65.24 |
| EES05730 | Sorghum | cytosol | 63.9 | 64.71 |
| Zm00001d051459_P001 | Maize | cytosol | 63.07 | 63.87 |
| KRH31541 | Soybean | nucleus | 59.75 | 61.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.09 | 59.83 |
| HORVU5Hr1G069360.3 | Barley | cytosol | 55.19 | 51.95 |
| Os05t0569500-01 | Rice | cytosol, plastid | 53.94 | 50.58 |
| HORVU7Hr1G074020.2 | Barley | cytosol | 45.23 | 47.39 |
| Bra025063.1-P | Field mustard | cytosol | 34.02 | 33.33 |
| Bra032330.1-P | Field mustard | cytosol | 32.37 | 32.91 |
| Bra012566.1-P | Field mustard | cytosol | 29.88 | 32.14 |
| Bra013362.1-P | Field mustard | cytosol | 33.61 | 16.77 |
Protein Annotations
Description
AT2G31985 (E=3e-126) | unknown protein
Coordinates
chrA04:-:14337360..14338948
Molecular Weight (calculated)
27026.4 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.293
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAVHSSTT PGPEVPGEAT KTGTSIVDTA TSAVQSFAPV NQIHQHLCAF HFYAYDMTRQ VEAHHFCSHV NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDEEKK LWHTHEWEVK GGFLFMPGVP GPIQRQDLDK VAKTYGKVFH FWQVDLGHDL PIGLPNVMMA VTRDGQLFHE MIQETEKRFG VSIEGEREAR
201: AYMSGPELGI HPLANGGGKG LKLELREVDI KPVESVARVF V
101: FMTLPDEEKK LWHTHEWEVK GGFLFMPGVP GPIQRQDLDK VAKTYGKVFH FWQVDLGHDL PIGLPNVMMA VTRDGQLFHE MIQETEKRFG VSIEGEREAR
201: AYMSGPELGI HPLANGGGKG LKLELREVDI KPVESVARVF V
001: MEKAVHSSTT SGPAVPGETT KTGTSIIDTA ASAVQSFAPV NQIHQHLCAF HFYADDMARQ VEAHHFCSHV NEEMRQCLIY DGPDANARLI GLEYIVSEKL
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
Arabidopsis Description
OBAP1BOil body-associated protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.