Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G069140.1 | |
| HORVU3Hr1G071490.2 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G250600.1 | Wheat | cytosol | 71.48 | 77.54 |
| TraesCS5B01G241900.1 | Wheat | cytosol | 71.09 | 77.12 |
| TraesCS5A01G239600.1 | Wheat | cytosol | 66.8 | 76.68 |
| TraesCS5A01G243900.1 | Wheat | cytosol | 69.92 | 75.85 |
| EES05730 | Sorghum | cytosol | 65.62 | 70.59 |
| Zm00001d051459_P001 | Maize | cytosol | 64.84 | 69.75 |
| Os05t0569500-01 | Rice | cytosol, plastid | 63.67 | 63.42 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 55.47 | 60.94 |
| Solyc09g098120.2.1 | Tomato | cytosol | 54.69 | 58.82 |
| PGSC0003DMT400016814 | Potato | cytosol | 54.69 | 58.82 |
| HORVU7Hr1G074020.2 | Barley | cytosol | 52.34 | 58.26 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.73 | 57.69 |
| CDY68306 | Canola | cytosol | 51.95 | 55.19 |
| CDY66704 | Canola | cytosol | 51.95 | 55.19 |
| Bra021765.1-P | Field mustard | cytosol | 51.95 | 55.19 |
| AT1G05510.1 | Thale cress | cytosol | 50.78 | 53.94 |
| AT2G31985.1 | Thale cress | cytosol | 50.0 | 53.11 |
| CDY10117 | Canola | cytosol | 48.83 | 51.87 |
| CDY47277 | Canola | cytosol | 48.44 | 51.45 |
| Bra015432.1-P | Field mustard | cytosol | 48.44 | 51.45 |
| KRH31541 | Soybean | nucleus | 45.31 | 49.57 |
| HORVU3Hr1G071490.2 | Barley | cytosol | 31.64 | 32.66 |
| HORVU3Hr1G069140.1 | Barley | cytosol | 31.64 | 31.4 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G069360.3 | EnsemblPlantsGene:HORVU5Hr1G069360 | InterPro:OBAP-like | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF0 | PFAM:PF06884 |
| SEG:seg | UniParc:UPI000B484C52 | UniProt:A0A287RNR0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:522146928..522148358
Molecular Weight (calculated)
28450.0 Da
IEP (calculated)
5.698
GRAVY (calculated)
-0.232
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASCHDVDV PGKATETGTA LLETATGAIQ GFGPINQIHQ HLCAFHFYGD DMTRQVEAHH FCAHLNEDVR QCLIFDGPDA GARLIGLEYI VTEELFLTLP
101: DEEKPLWHTH EFEVRGGVLF MPGVPGVVER RDLEKVARTY GKTVHFWQVD RGDALPLGVP QIMMALTREG QLRQDLADCK AACMVFVFLV SWFVHRAVSC
201: RITDDCYVRG CRCGEEVRRV VREGEGEPGV HERAGARHPP AGQCCRQGLE DGDPRG
101: DEEKPLWHTH EFEVRGGVLF MPGVPGVVER RDLEKVARTY GKTVHFWQVD RGDALPLGVP QIMMALTREG QLRQDLADCK AACMVFVFLV SWFVHRAVSC
201: RITDDCYVRG CRCGEEVRRV VREGEGEPGV HERAGARHPP AGQCCRQGLE DGDPRG
001: MEKAVHSSTT SGPAVPGETT KTGTSIIDTA ASAVQSFAPV NQIHQHLCAF HFYADDMARQ VEAHHFCSHV NEEMRQCLIY DGPDANARLI GLEYIVSEKL
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
Arabidopsis Description
OBAP1BOil body-associated protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.