Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021765.1-P | Field mustard | cytosol | 91.7 | 91.7 |
| CDY68306 | Canola | cytosol | 91.7 | 91.7 |
| CDY66704 | Canola | cytosol | 91.29 | 91.29 |
| AT1G05510.1 | Thale cress | cytosol | 82.16 | 82.16 |
| Solyc09g098120.2.1 | Tomato | cytosol | 64.73 | 65.55 |
| PGSC0003DMT400016814 | Potato | cytosol | 64.32 | 65.13 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 61.83 | 63.95 |
| EES05730 | Sorghum | cytosol | 62.66 | 63.45 |
| TraesCS5A01G239600.1 | Wheat | cytosol | 58.51 | 63.23 |
| TraesCS5D01G250600.1 | Wheat | cytosol | 61.83 | 63.14 |
| TraesCS5B01G241900.1 | Wheat | cytosol | 61.41 | 62.71 |
| TraesCS5A01G243900.1 | Wheat | cytosol | 61.41 | 62.71 |
| Zm00001d051459_P001 | Maize | cytosol | 61.41 | 62.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 60.17 | 61.97 |
| KRH31541 | Soybean | nucleus | 59.34 | 61.11 |
| HORVU5Hr1G069360.3 | Barley | cytosol | 53.11 | 50.0 |
| Os05t0569500-01 | Rice | cytosol, plastid | 53.11 | 49.81 |
| HORVU7Hr1G074020.2 | Barley | cytosol | 45.23 | 47.39 |
| AT4G18920.1 | Thale cress | cytosol | 34.85 | 34.01 |
| AT1G29680.1 | Thale cress | cytosol | 31.95 | 32.49 |
| AT5G45690.1 | Thale cress | nucleus | 32.78 | 31.98 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817759 | UniProt:A0A178VMF4 | EMBL:AC006223 | ProteinID:AEC08618.1 | EMBL:AK117989 |
| EMBL:AK118685 | ArrayExpress:AT2G31985 | EnsemblPlantsGene:AT2G31985 | RefSeq:AT2G31985 | TAIR:AT2G31985 | RefSeq:AT2G31985-TAIR-G |
| EnsemblPlants:AT2G31985.1 | TAIR:AT2G31985.1 | Unigene:At.45848 | EMBL:BT005262 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | RefSeq:NP_850179.1 | ProteinID:OAP07660.1 | InterPro:OBAP-like | PFAM:PF06884 |
| PANTHER:PTHR31360 | PANTHER:PTHR31360:SF0 | UniProt:Q8GWR2 | UniParc:UPI000000C5B3 | : | : |
Description
OBAP1BOil body-associated protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8GWR2]
Coordinates
chr2:-:13613928..13615692
Molecular Weight (calculated)
26761.0 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.256
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAVHSSTT SGPAVPGETT KTGTSIIDTA ASAVQSFAPV NQIHQHLCAF HFYADDMARQ VEAHHFCSHV NEEMRQCLIY DGPDANARLI GLEYIVSEKL
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
101: FMTLPDEEKK LWHSHEWEVK GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE MIQEAEKRFG VSVEGERDSR
201: AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.