Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05510.1 | CDX99847 | AT1G29680.1 | 21798944 |
| AT1G05510.1 | CDY26320 | AT1G29680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015432.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY10117 | Canola | cytosol | 94.61 | 94.61 |
| AT1G05510.1 | Thale cress | cytosol | 89.63 | 89.63 |
| CDY68306 | Canola | cytosol | 79.67 | 79.67 |
| CDY66704 | Canola | cytosol | 79.25 | 79.25 |
| Solyc09g098120.2.1 | Tomato | cytosol | 68.05 | 68.91 |
| VIT_05s0062g00810.t01 | Wine grape | cytosol | 65.98 | 68.24 |
| PGSC0003DMT400016814 | Potato | cytosol | 67.22 | 68.07 |
| TraesCS5A01G239600.1 | Wheat | cytosol | 59.75 | 64.57 |
| TraesCS5D01G250600.1 | Wheat | cytosol | 63.07 | 64.41 |
| TraesCS5A01G243900.1 | Wheat | cytosol | 63.07 | 64.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.24 | 64.1 |
| TraesCS5B01G241900.1 | Wheat | cytosol | 62.66 | 63.98 |
| EES05730 | Sorghum | cytosol | 62.24 | 63.03 |
| Zm00001d051459_P001 | Maize | cytosol | 61.41 | 62.18 |
| KRH31541 | Soybean | nucleus | 59.34 | 61.11 |
| Os05t0569500-01 | Rice | cytosol, plastid | 55.19 | 51.75 |
| HORVU5Hr1G069360.3 | Barley | cytosol | 51.45 | 48.44 |
| HORVU7Hr1G074020.2 | Barley | cytosol | 45.64 | 47.83 |
| CDY59324 | Canola | cytosol | 39.0 | 38.21 |
| CDY39441 | Canola | cytosol | 38.17 | 37.4 |
| CDY26320 | Canola | cytosol | 35.68 | 36.91 |
| CDX99410 | Canola | cytosol | 37.76 | 36.84 |
| CDX99847 | Canola | cytosol | 35.27 | 35.87 |
| CDY01566 | Canola | cytosol | 9.13 | 25.0 |
| CDX78906 | Canola | cytosol | 36.93 | 18.35 |
Protein Annotations
| EnsemblPlants:CDY47277 | EnsemblPlantsGene:GSBRNA2T00087085001 | InterPro:OBAP-like | PANTHER:PTHR31360 | PANTHER:PTHR31360:SF0 | PFAM:PF06884 |
| ProteinID:CDY47277 | ProteinID:CDY47277.1 | UniParc:UPI0002543722 | UniProt:A0A078IAU6 | MapMan:35.1 | : |
Description
BnaA10g03690DBnaA10g03690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAU6]
Coordinates
chrLK032705:-:81669..82944
Molecular Weight (calculated)
27257.9 Da
IEP (calculated)
6.182
GRAVY (calculated)
-0.361
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAVHLSTK GGPEVPGEPT KMGTSMVDSA AAAVQSFTPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVSEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EPIQRQDLEI VAKTYGKVYH FWQVDLGHEL PIGLPNIMMA VTRDGQLYPE MVKETEKKFG ISIDKERESR
201: AYMTGPDHGI HPLANGGGKG LKLEMREVDI KPVESVPRVF V
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EPIQRQDLEI VAKTYGKVYH FWQVDLGHEL PIGLPNIMMA VTRDGQLYPE MVKETEKKFG ISIDKERESR
201: AYMTGPDHGI HPLANGGGKG LKLEMREVDI KPVESVPRVF V
001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V
101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR
201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V
Arabidopsis Description
OBAP1AOil body-associated protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVY7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.