Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g116320.2.1 | Tomato | nucleus | 76.09 | 68.46 |
| PGSC0003DMT400001613 | Potato | nucleus | 75.54 | 67.15 |
| VIT_01s0026g02200.t01 | Wine grape | nucleus | 64.13 | 66.86 |
| KRH03466 | Soybean | nucleus | 74.18 | 66.1 |
| KRH56919 | Soybean | nucleus | 74.46 | 65.87 |
| KRH63357 | Soybean | nucleus | 68.75 | 63.57 |
| KRH54542 | Soybean | nucleus | 70.11 | 63.24 |
| GSMUA_Achr4P00500_001 | Banana | nucleus | 45.92 | 62.13 |
| GSMUA_Achr6P02720_001 | Banana | nucleus | 44.57 | 60.74 |
| GSMUA_Achr7P20990_001 | Banana | nucleus | 42.66 | 58.58 |
| CDY36943 | Canola | nucleus | 28.26 | 55.03 |
| CDY24170 | Canola | nucleus | 32.61 | 49.38 |
| Zm00001d052256_P001 | Maize | cytosol, nucleus, peroxisome | 51.63 | 48.84 |
| Os06t0226700-01 | Rice | nucleus | 51.09 | 48.58 |
| EER88112 | Sorghum | nucleus | 51.9 | 48.48 |
| Zm00001d037221_P001 | Maize | cytosol, nucleus, peroxisome | 49.18 | 47.76 |
| EES07255 | Sorghum | nucleus | 51.63 | 47.74 |
| GSMUA_Achr7P17990_001 | Banana | nucleus | 43.48 | 47.62 |
| Zm00001d018045_P001 | Maize | cytosol, nucleus, peroxisome | 51.63 | 47.5 |
| TraesCS6D01G285600.1 | Wheat | nucleus | 51.09 | 46.88 |
| HORVU6Hr1G075650.1 | Barley | nucleus | 51.09 | 46.77 |
| TraesCS6B01G334900.1 | Wheat | nucleus | 50.82 | 46.52 |
| TraesCS6A01G306500.1 | Wheat | nucleus | 50.82 | 46.29 |
| Os02t0747400-01 | Rice | nucleus | 51.09 | 45.85 |
| TraesCS7B01G091900.1 | Wheat | cytosol, nucleus, peroxisome | 46.2 | 45.7 |
| Zm00001d044836_P001 | Maize | nucleus | 44.29 | 45.66 |
| TraesCS7D01G187600.1 | Wheat | cytosol | 48.1 | 44.25 |
| HORVU7Hr1G038130.1 | Barley | nucleus | 47.83 | 44.0 |
| Bra018126.1-P | Field mustard | nucleus | 54.35 | 42.92 |
| VIT_16s0022g02480.t01 | Wine grape | nucleus | 19.02 | 41.42 |
| AT3G47620.1 | Thale cress | nucleus | 54.89 | 41.31 |
| VIT_14s0068g01690.t01 | Wine grape | nucleus | 28.53 | 35.47 |
| VIT_08s0040g01600.t01 | Wine grape | nucleus, plastid | 19.02 | 34.31 |
| VIT_10s0042g00170.t01 | Wine grape | nucleus | 23.64 | 34.12 |
| VIT_18s0117g00340.t01 | Wine grape | nucleus | 30.16 | 31.27 |
| VIT_15s0048g01150.t01 | Wine grape | nucleus | 25.82 | 28.02 |
| VIT_12s0035g00690.t01 | Wine grape | nucleus, plastid | 33.15 | 26.52 |
| VIT_02s0025g04590.t01 | Wine grape | nucleus | 23.91 | 21.41 |
Protein Annotations
| EntrezGene:100245013 | wikigene:100245013 | MapMan:15.5.19 | ProteinID:CCB43098 | ProteinID:CCB43098.1 | UniProt:F6GT89 |
| EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | EntrezGene:LOC100245013 |
| wikigene:LOC100245013 | PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF40 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI0002109CC8 | ArrayExpress:VIT_17s0000g06020 | EnsemblPlantsGene:VIT_17s0000g06020 | EnsemblPlants:VIT_17s0000g06020.t01 | RefSeq:XP_002268569 |
| RefSeq:XP_002268569.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:6588742..6590077
Molecular Weight (calculated)
39439.8 Da
IEP (calculated)
7.812
GRAVY (calculated)
-0.647
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGDELHRP NFPFQLLEKK EEEACSSSGY PSLAISSAEP NTNRSNSSLQ IAAEPSKKPP PKRTSTKDRH TKVDGRGRRI RMPALCAARV FQLTRELGHK
101: SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS GSSMSVPSQL RSTYFNPNFS VPQRRSLFPG LSSENSSTLV NFQSNNLNSM FQAKQELRDT
201: SLDLSETEES IGRKRRPEQD LSQQQMGSYL LQSSTGSIPA SHGQIPANFW MLTNSNNQVM SADPIWPFPS VNNSNLYRGT MSSGLHFMNF PTPVALLPSQ
301: QLSSGGGGGS GGGGGGGGSG MGEGHFNMLA GLNPYRPVMG SGVSESQASG SQSHHGGDDR HDATSHHS
101: SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSS GSSMSVPSQL RSTYFNPNFS VPQRRSLFPG LSSENSSTLV NFQSNNLNSM FQAKQELRDT
201: SLDLSETEES IGRKRRPEQD LSQQQMGSYL LQSSTGSIPA SHGQIPANFW MLTNSNNQVM SADPIWPFPS VNNSNLYRGT MSSGLHFMNF PTPVALLPSQ
301: QLSSGGGGGS GGGGGGGGSG MGEGHFNMLA GLNPYRPVMG SGVSESQASG SQSHHGGDDR HDATSHHS
001: MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
101: ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH
201: FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ
301: HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM
401: NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD
Arabidopsis Description
TCP14Transcription factor TCP14 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.