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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:peroxisome, secretory
BaCelLo:secretory
EpiLoc:peroxisome
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0011g06410.t01
VIT_09s0002g00550.t01
VIT_09s0002g00570.t01
VIT_09s0002g00580.t01
VIT_13s0064g00520.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54010.1 VIT_01s0011g06410.t01 AT2G01950.1 19000166
AT1G54030.1 VIT_13s0064g00520.t01 AT1G52400.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54000.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54010.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT1G54020.2 23155454
AT1G54030.1 VIT_13s0064g00520.t01 AT3G09260.1 23155454
AT1G54030.1 VIT_09s0002g00550.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_09s0002g00570.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_09s0002g00580.t01 AT3G14210.1 23155454
AT1G54030.1 VIT_13s0064g00520.t01 AT3G21370.1 23155454
AT3G14220.1 VIT_01s0011g06410.t01 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_09s0002g00550.t01 Wine grape extracellular 79.78 81.32
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 65.5 66.39
VIT_09s0002g00530.t01 Wine grape cytosol 49.6 53.49
VIT_09s0002g00510.t01 Wine grape extracellular 51.21 51.49
VIT_09s0002g00540.t01 Wine grape extracellular 52.56 49.49
VIT_09s0002g00520.t01 Wine grape extracellular 41.24 47.96
Solyc11g051060.1.1 Tomato vacuole 46.36 47.78
VIT_09s0002g00500.t01 Wine grape cytosol 36.93 47.08
PGSC0003DMT400016126 Potato plasma membrane, vacuole 45.82 46.32
PGSC0003DMT400080416 Potato golgi, vacuole 45.01 46.13
Solyc06g065010.2.1 Tomato nucleus 44.74 45.86
Solyc01g109020.1.1 Tomato extracellular 23.45 45.79
PGSC0003DMT400013272 Potato extracellular, vacuole 45.01 45.5
Solyc11g021040.1.1 Tomato extracellular 25.61 45.45
VIT_09s0002g00490.t01 Wine grape vacuole 45.55 44.83
Solyc06g064960.2.1 Tomato extracellular 43.94 44.54
PGSC0003DMT400017106 Potato extracellular 43.13 43.24
Solyc06g064990.2.1 Tomato extracellular 44.2 42.38
Solyc06g064980.2.1 Tomato extracellular 43.67 42.3
Solyc11g051100.1.1 Tomato cytosol, extracellular 8.09 42.25
PGSC0003DMT400016123 Potato cytosol 9.43 40.23
PGSC0003DMT400074599 Potato cytosol 35.85 40.18
VIT_11s0016g00430.t01 Wine grape extracellular 42.05 39.9
Solyc06g064970.2.1 Tomato extracellular, vacuole 37.2 38.55
Solyc04g028470.1.1 Tomato cytosol 32.34 37.5
Solyc11g051120.1.1 Tomato cytosol 13.21 33.79
CDY54192 Canola extracellular 11.59 32.09
CDY33240 Canola vacuole 30.19 31.2
Bra021542.1-P Field mustard vacuole 29.65 30.64
CDY39106 Canola vacuole 29.65 30.64
AT3G14220.1 Thale cress vacuole 29.11 29.75
Bra014371.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 30.46 29.05
Bra037957.1-P Field mustard extracellular 29.65 28.72
CDY36628 Canola cytosol 29.65 28.72
Bra030911.1-P Field mustard extracellular, vacuole 30.46 28.61
CDY54197 Canola extracellular, vacuole 30.46 28.61
CDY54588 Canola extracellular 29.65 28.5
AT1G54020.2 Thale cress endoplasmic reticulum 28.57 28.49
CDY61480 Canola extracellular, vacuole 30.19 28.43
Bra037955.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 30.19 28.43
CDY54196 Canola extracellular 29.65 28.28
Bra030915.1-P Field mustard extracellular 29.38 28.24
CDY54591 Canola extracellular 29.38 28.17
VIT_01s0011g04540.t01 Wine grape extracellular 27.22 28.13
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 27.22 27.98
AT1G54010.1 Thale cress extracellular 28.84 27.72
CDY51412 Canola cytosol 28.57 27.68
Bra037954.1-P Field mustard endoplasmic reticulum, extracellular, golgi 28.57 27.68
CDY30675 Canola endoplasmic reticulum, vacuole 28.57 27.53
CDY30680 Canola mitochondrion 29.92 27.48
AT3G14210.1 Thale cress extracellular, golgi 28.84 27.3
Bra014374.1-P Field mustard endoplasmic reticulum, vacuole 28.3 27.27
CDY08211 Canola endoplasmic reticulum, vacuole 28.3 27.27
Bra027359.1-P Field mustard extracellular 27.49 27.13
Bra014372.1-P Field mustard extracellular 28.03 27.08
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 28.03 27.08
Bra027358.1-P Field mustard extracellular 28.3 27.06
CDX98428 Canola extracellular, plasma membrane, vacuole 28.3 27.06
CDX97556 Canola extracellular 28.3 27.06
CDY36623 Canola endoplasmic reticulum 27.76 26.89
AT1G54030.1 Thale cress endoplasmic reticulum, nucleus, vacuole 30.19 26.86
CDY08214 Canola cytosol 19.95 26.81
CDX97555 Canola extracellular 27.76 26.68
AT1G54000.1 Thale cress endoplasmic reticulum, extracellular, vacuole 28.03 26.6
Bra030913.1-P Field mustard cytosol 19.68 26.07
CDY54194 Canola cytosol 19.68 26.07
CDY30676 Canola cytosol 17.79 25.98
Bra030912.1-P Field mustard extracellular 29.65 24.72
CDY51410 Canola mitochondrion, plastid 8.89 23.57
CDY54198 Canola cytosol 7.55 21.05
CDY36625 Canola extracellular 7.28 19.85
Protein Annotations
EntrezGene:100265188wikigene:100265188Gene3D:3.40.50.1110MapMan:35.1ProteinID:CCB59251ProteinID:CCB59251.1
UniProt:F6HXP4EMBL:FN596494InterPro:GDSLGO:GO:0003674GO:GO:0003824GO:GO:0016787
GO:GO:0016788InterPro:IPR036514EntrezGene:LOC100265188wikigene:LOC100265188PFAM:PF00657PANTHER:PTHR22835
PANTHER:PTHR22835:SF301InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_likeSUPFAM:SSF52266SignalP:SignalP-noTMTIGR:TC59935
UniParc:UPI0001983EE6ArrayExpress:VIT_09s0002g00570EnsemblPlantsGene:VIT_09s0002g00570EnsemblPlants:VIT_09s0002g00570.t01unigene:Vvi.6166RefSeq:XP_002268150
RefSeq:XP_002268150.1:::::
Description
No Description!
Coordinates
chr9:+:398036..399626
Molecular Weight (calculated)
40929.0 Da
IEP (calculated)
9.371
GRAVY (calculated)
-0.281
Length
371 amino acids
Sequence
(BLAST)
001: MKSLSFHFCV LIIFGSLLIP AICHGHDSHS QKPHKHVPLF VFGDSLFDPG NNLYLNTSHK EASAYWPYGE TFFKRPTGRL SDGRLVPDFI AEFMELPLTT
101: AYLQPGTHRF THGSNFASGG AGVLADTHPG TISLPLQLSY FKNVVKQLKQ KLGEVKTKKL LMRAVYLFSI GGNDYFGFYM KNQNASQSSQ TQFVGMVIRN
201: LTNALEEIYQ IGGRKIAFQN VGPLGCVPTN RAKTGNGACA EEASAMAKMH NAALANVLKN LQTRLPRFKY SIFDYYNTLS DKINHPSKYG FKEGKSACCG
301: SGAYRANNCG GQGVGGTTTK FELCSIPGDY VWFDGGHTTE RANRQLAELL WNGTPNCTAP HNIKQLFGHM E
Best Arabidopsis Sequence Match ( AT3G14225.1 )
(BLAST)
001: MASPRFNSII IILFICTISL SIVSISCKED LKTNQAALFA FGDSLFEAGN NNYFDSISSF RSNFWPYGKT TFKFPTGRVS DGRIMIDFIA EYAWLPLIPP
101: NLQPGYSNSQ LTYGLNFATT AAGVFAGTFP GSVTNLSKDL GTQLNNFKNV EKTLRSNLGD AEARRVISKA VYLFHIGAND YQYPFFANTS TFSNTTKERF
201: IDFVIGNTTT VIEELYKLGA RKFGFLSLGP FGCTPSALII NSTKIGSCFE PVTELINLHN QEFPKVLRRL ERRLSGFKYA LHDFHTSLSQ RINNPSRYGF
301: KEGEMACCGS GPLRGINTCG FRNGPSQGYK LCENADDYVF FDPSHLTETA HQQIAELIWS GPPNVTAPYN LKTLFRL
Arabidopsis Description
GLIP4GDSL esterase/lipase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP1]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.