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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021542.1-P Field mustard vacuole 96.94 96.94
CDY39106 Canola vacuole 96.94 96.94
AT3G14220.1 Thale cress vacuole 80.78 79.89
CDY51412 Canola cytosol 45.13 42.3
CDY54591 Canola extracellular 45.4 42.12
CDY08211 Canola endoplasmic reticulum, vacuole 45.13 42.08
CDY30675 Canola endoplasmic reticulum, vacuole 45.13 42.08
CDX98428 Canola extracellular, plasma membrane, vacuole 45.13 41.75
CDX97556 Canola extracellular 44.85 41.49
CDY54588 Canola extracellular 44.57 41.45
CDY36628 Canola cytosol 44.01 41.25
CDY36623 Canola endoplasmic reticulum 44.01 41.25
CDY54196 Canola extracellular 44.57 41.13
CDY54192 Canola extracellular 15.32 41.04
CDY08213 Canola endoplasmic reticulum, extracellular, vacuole 43.73 40.89
CDX97555 Canola extracellular 43.73 40.67
CDY30676 Canola cytosol 28.13 39.76
CDY54194 Canola cytosol 29.53 37.86
CDY51410 Canola mitochondrion, plastid 14.21 36.43
CDY61480 Canola extracellular, vacuole 37.88 34.52
CDY54197 Canola extracellular, vacuole 37.88 34.43
CDY51411 Canola endoplasmic reticulum, extracellular, vacuole 34.26 34.07
CDY30680 Canola mitochondrion 38.16 33.91
KRG97291 Soybean extracellular 9.75 33.33
CDY54198 Canola cytosol 12.26 33.08
CDY08214 Canola cytosol 24.23 31.52
VIT_09s0002g00550.t01 Wine grape extracellular 31.48 31.04
PGSC0003DMT400016123 Potato cytosol 7.52 31.03
VIT_09s0002g00570.t01 Wine grape extracellular 31.2 30.19
VIT_09s0002g00580.t01 Wine grape endoplasmic reticulum, golgi 30.08 29.51
CDX97557 Canola extracellular 30.64 29.49
CDX98432 Canola extracellular 30.64 29.49
Solyc11g051060.1.1 Tomato vacuole 29.25 29.17
KRH69020 Soybean extracellular 28.41 29.14
CDY09515 Canola endoplasmic reticulum, extracellular, golgi 10.59 29.01
PGSC0003DMT400016126 Potato plasma membrane, vacuole 29.53 28.88
CDY36619 Canola endoplasmic reticulum, plasma membrane 29.25 28.3
CDY02490 Canola extracellular, vacuole 28.69 27.76
KRG94370 Soybean extracellular 28.13 27.67
KRH07083 Soybean extracellular 21.17 27.64
Solyc06g064960.2.1 Tomato extracellular 28.13 27.6
KRH47690 Soybean extracellular, vacuole 28.13 27.6
CDX98433 Canola extracellular, vacuole 28.69 27.54
CDX97558 Canola extracellular 28.69 27.54
Solyc04g028470.1.1 Tomato cytosol 24.51 27.5
PGSC0003DMT400074599 Potato cytosol 25.35 27.49
CDY36617 Canola plasma membrane 26.18 27.17
CDY24064 Canola plasma membrane 28.41 27.13
PGSC0003DMT400013272 Potato extracellular, vacuole 27.58 26.98
Solyc06g064980.2.1 Tomato extracellular 28.41 26.63
CDY30674 Canola extracellular, vacuole 27.3 26.34
CDY69407 Canola extracellular 18.38 26.29
KRG97292 Soybean extracellular 26.74 26.23
Solyc06g064990.2.1 Tomato extracellular 28.13 26.1
KRH13794 Soybean nucleus 26.74 26.02
Solyc01g109020.1.1 Tomato extracellular 13.65 25.79
Solyc06g065010.2.1 Tomato nucleus 25.91 25.69
PGSC0003DMT400080416 Potato golgi, vacuole 25.91 25.69
KRH13793 Soybean nucleus 26.18 25.47
Solyc11g051100.1.1 Tomato cytosol, extracellular 5.01 25.35
CDY25680 Canola extracellular, plasma membrane 11.7 25.15
PGSC0003DMT400017106 Potato extracellular 25.91 25.14
CDY02491 Canola plastid 11.7 24.71
Solyc11g021040.1.1 Tomato extracellular 14.21 24.4
CDY69208 Canola mitochondrion 21.17 24.36
KRH06260 Soybean cytosol, peroxisome 17.83 23.53
CDY71922 Canola extracellular, plasma membrane 14.21 22.97
Solyc06g064970.2.1 Tomato extracellular, vacuole 22.01 22.07
Solyc11g051120.1.1 Tomato cytosol 8.36 20.69
CDY36625 Canola extracellular 7.24 19.12
CDX75755 Canola plastid 21.73 18.18
Protein Annotations
EnsemblPlants:CDY33240EnsemblPlantsGene:GSBRNA2T00054000001Gene3D:3.40.50.1110GO:A0A078H3M0GO:GO:0003674GO:GO:0003824
GO:GO:0016787GO:GO:0016788InterPro:GDSLInterPro:IPR036514InterPro:SGNH_hydro_sfInterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835PANTHER:PTHR22835:SF461PFAM:PF00657ProteinID:CDY33240ProteinID:CDY33240.1SEG:seg
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEB433UniProt:A0A078H3M0MapMan:35.1:
Description
BnaC01g37130DBnaC01g37130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3M0]
Coordinates
chrLK032309:-:306056..307776
Molecular Weight (calculated)
39669.2 Da
IEP (calculated)
7.189
GRAVY (calculated)
-0.138
Length
359 amino acids
Sequence
(BLAST)
001: MAINRNLIIF AGLLASFTLA SFPANVAGEP PLLFTFGDSS YDVGNTKFFS SAFDPATTWP YGESIDFPTG RWSDGNIVPD FIGRLVGNQE PVPPVLDPKA
101: DLSRGASFAI SGATVLGSPS DTMSSGQQIL KFIELHKKWS DKERAEAIYM INIGADDYLN FAKAHPNANP VEQVAFVARV LQKLSRDLMS LYKSGGARKF
201: AVQNLGPLGC LPIVRQEFKT GESCMEMVNF MVKTHNERLG HVLFAITVRF RSLRYSVFDY NGEILRRINE PSCHGYTDTT TSCCGTGSRN AFGCGYSNVH
301: SKLCSYQKGF LFFDGRHNTE KTDEEIANLF YAGDRHVVYP VNIRDLVGKS VTFLPAQEI
Best Arabidopsis Sequence Match ( AT3G14220.1 )
(BLAST)
001: MAKNRNLVFF LGVLASFTLS SFPVTVSGEP PILFTFGDSS YDVGNTKFFS SEFDPATTWP YGDSIDDPSG RWSDGHIVPD FVGRLIGHRE PIPPVLDPKA
101: DLSRGASFAI AGAVVLGSQS TTASMNFGQQ ISKFLELHKQ WTDKERAEAI YMVNIGAEDY LNFAKAHPNA NTVEQLTQVA HVLQRIPREL TSLYRAGGAR
201: KFAVQNLGPL GCLPIVRQEF KTGENCMEMV NFMVKTHNER LSRLLVAITV PLLYRGFRYS LFDFNGEILR RINEPSLHGY TDTTTSCCGT GSRNAYGCGY
301: SNVHAKLCSY QKSFLFFDGR HNTEKTDEEV ANLFYSGDKH VVSPMNIKDL VGKAATDLLA QEI
Arabidopsis Description
GDSL esterase/lipase At3g14220 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP2]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.