Factsheet for Bra021542.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G14220.1	Bra024839.1-P	AT2G01950.1	19000166
AT3G14220.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39106	Canola	vacuole	99.44	99.44
CDY33240	Canola	vacuole	96.94	96.94
AT3G14220.1	Thale cress	vacuole	81.34	80.44
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	45.68	42.6
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	44.57	41.78
Bra030915.1-P	Field mustard	extracellular	44.85	41.71
Bra014372.1-P	Field mustard	extracellular	44.29	41.41
Bra037957.1-P	Field mustard	extracellular	44.01	41.25
Bra027358.1-P	Field mustard	extracellular	44.57	41.24
Bra027359.1-P	Field mustard	extracellular	42.9	40.96
Bra030913.1-P	Field mustard	cytosol	29.8	38.21
Bra030912.1-P	Field mustard	extracellular	45.68	36.85
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	37.88	34.96
Bra030911.1-P	Field mustard	extracellular, vacuole	38.16	34.68
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.77	33.5
KRG97291	Soybean	extracellular	9.47	32.38
PGSC0003DMT400016123	Potato	cytosol	7.8	32.18
VIT_09s0002g00550.t01	Wine grape	extracellular	30.92	30.49
VIT_09s0002g00570.t01	Wine grape	extracellular	30.64	29.65
Bra027357.1-P	Field mustard	extracellular	30.64	29.49
KRH69020	Soybean	extracellular	28.69	29.43
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	29.53	28.96
Solyc11g051060.1.1	Tomato	vacuole	28.97	28.89
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	29.25	28.61
KRG94370	Soybean	extracellular	27.86	27.4
Solyc06g064960.2.1	Tomato	extracellular	27.86	27.32
KRH47690	Soybean	extracellular, vacuole	27.86	27.32
Bra027356.1-P	Field mustard	extracellular	28.13	27.01
Bra030917.1-P	Field mustard	extracellular, vacuole	27.86	26.95
KRH07083	Soybean	extracellular	20.61	26.91
PGSC0003DMT400074599	Potato	cytosol	24.79	26.89
Solyc04g028470.1.1	Tomato	cytosol	23.96	26.88
PGSC0003DMT400013272	Potato	extracellular, vacuole	27.3	26.7
Bra030916.1-P	Field mustard	plastid	26.74	26.45
Solyc06g064980.2.1	Tomato	extracellular	28.13	26.37
KRH13794	Soybean	nucleus	27.02	26.29
Solyc06g064990.2.1	Tomato	extracellular	27.86	25.84
KRH13793	Soybean	nucleus	26.46	25.75
Solyc06g065010.2.1	Tomato	nucleus	25.91	25.69
Bra039701.1-P	Field mustard	extracellular, plasma membrane	22.84	25.55
KRG97292	Soybean	extracellular	25.91	25.41
Solyc11g051100.1.1	Tomato	cytosol, extracellular	5.01	25.35
Bra014375.1-P	Field mustard	extracellular, vacuole	26.18	25.27
Solyc01g109020.1.1	Tomato	extracellular	13.37	25.26
PGSC0003DMT400080416	Potato	golgi, vacuole	25.35	25.14
Bra007962.1-P	Field mustard	extracellular, vacuole	24.51	24.86
PGSC0003DMT400017106	Potato	extracellular	25.35	24.59
Solyc11g021040.1.1	Tomato	extracellular	13.93	23.92
KRH06260	Soybean	cytosol, peroxisome	18.11	23.9
Bra030918.1-P	Field mustard	plastid	20.33	23.47
Solyc06g064970.2.1	Tomato	extracellular, vacuole	21.73	21.79
Solyc11g051120.1.1	Tomato	cytosol	8.08	20.0

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra021542	EnsemblPlants:Bra021542.1	EnsemblPlants:Bra021542.1-P	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	UniProt:M4DYE6	PFAM:PF00657
PANTHER:PTHR22835	PANTHER:PTHR22835:SF461	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000254437E	SEG:seg	:	:	:	:

Description

AT3G14220 (E=6e-167) | GDSL-motif lipase/hydrolase family protein

Coordinates

chrA01:-:24663418..24664813

Molecular Weight (calculated)

39587.2 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.133

Length

359 amino acids

Sequence
(BLAST)

001: MAINRNLIIF AGLLASFSLA SFPANVAGEP PLLFTFGDSS YDVGNTKFFS SAFDPATTWP YGESIDFPTG RWSDGNIVPD FVGRLVGNHE PVPPVLDPKA
101: DLSRGASFAI SGATVLGSPS DTMSFGQQIL KFIELHKKWS DKERAEAIYM INIGADDYLN FAKAHPNANP VEQVAFVARV LQKLSRDLMS LYKSGGARKL
201: AVQNLGPLGC LPIVRQEFKT GESCMEMVNF MVKTHNERLG PVLFAMTVRF RSLRYSVFDF NGEILRRINE PSRHGYTDTT TSCCGTGSRN AFGCGYSNVH
301: SKLCSYQKGF LFFDGRHNTE KTDEEIANLF YAGDKHVVSP VNIRDLVGKS VTFLPAQEI

Best Arabidopsis Sequence Match ( AT3G14220.1 )
(BLAST)

001: MAKNRNLVFF LGVLASFTLS SFPVTVSGEP PILFTFGDSS YDVGNTKFFS SEFDPATTWP YGDSIDDPSG RWSDGHIVPD FVGRLIGHRE PIPPVLDPKA
101: DLSRGASFAI AGAVVLGSQS TTASMNFGQQ ISKFLELHKQ WTDKERAEAI YMVNIGAEDY LNFAKAHPNA NTVEQLTQVA HVLQRIPREL TSLYRAGGAR
201: KFAVQNLGPL GCLPIVRQEF KTGENCMEMV NFMVKTHNER LSRLLVAITV PLLYRGFRYS LFDFNGEILR RINEPSLHGY TDTTTSCCGT GSRNAYGCGY
301: SNVHAKLCSY QKSFLFFDGR HNTEKTDEEV ANLFYSGDKH VVSPMNIKDL VGKAATDLLA QEI

Arabidopsis Description

GDSL esterase/lipase At3g14220 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.