Factsheet for Bra030916.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
plasma membrane 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular, plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69407	Canola	extracellular	67.49	97.61
CDY69208	Canola	mitochondrion	77.96	90.71
Bra030917.1-P	Field mustard	extracellular, vacuole	83.75	81.94
Bra014375.1-P	Field mustard	extracellular, vacuole	76.58	74.73
AT1G53990.1	Thale cress	extracellular, plasma membrane	74.1	73.3
Bra039701.1-P	Field mustard	extracellular, plasma membrane	64.46	72.9
Bra027357.1-P	Field mustard	extracellular	63.64	61.93
Bra027356.1-P	Field mustard	extracellular	58.95	57.22
PGSC0003DMT400016123	Potato	cytosol	11.29	47.13
Solyc01g109020.1.1	Tomato	extracellular	24.52	46.84
Solyc11g021040.1.1	Tomato	extracellular	26.72	46.41
PGSC0003DMT400080416	Potato	golgi, vacuole	46.01	46.13
Solyc11g051060.1.1	Tomato	vacuole	45.18	45.56
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	46.01	45.5
Solyc06g065010.2.1	Tomato	nucleus	44.9	45.03
PGSC0003DMT400013272	Potato	extracellular, vacuole	45.18	44.69
Solyc06g064960.2.1	Tomato	extracellular	42.7	42.35
Solyc11g051100.1.1	Tomato	cytosol, extracellular	8.26	42.25
Solyc06g064990.2.1	Tomato	extracellular	44.9	42.12
PGSC0003DMT400017106	Potato	extracellular	42.15	41.35
Bra030918.1-P	Field mustard	plastid	35.26	41.16
Solyc06g064980.2.1	Tomato	extracellular	43.25	40.99
PGSC0003DMT400074599	Potato	cytosol	35.26	38.67
Solyc04g028470.1.1	Tomato	cytosol	32.78	37.19
Solyc06g064970.2.1	Tomato	extracellular, vacuole	34.99	35.47
Bra030911.1-P	Field mustard	extracellular, vacuole	32.78	30.13
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	32.23	29.7
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	31.41	29.31
Bra007962.1-P	Field mustard	extracellular, vacuole	26.17	26.84
Bra021542.1-P	Field mustard	vacuole	26.45	26.74
Bra030915.1-P	Field mustard	extracellular	28.1	26.42
Bra037957.1-P	Field mustard	extracellular	27.55	26.11
Bra027359.1-P	Field mustard	extracellular	26.72	25.8
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	27.0	25.45
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	26.72	25.33
Solyc11g051120.1.1	Tomato	cytosol	9.92	24.83
Bra027358.1-P	Field mustard	extracellular	26.45	24.74
Bra014372.1-P	Field mustard	extracellular	26.17	24.74
Bra030913.1-P	Field mustard	cytosol	17.36	22.5
Bra030912.1-P	Field mustard	extracellular	26.17	21.35

Protein Annotations

Gene3D:3.40.50.1110	MapMan:35.1	EnsemblPlantsGene:Bra030916	EnsemblPlants:Bra030916.1	EnsemblPlants:Bra030916.1-P	InterPro:GDSL
GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016298
GO:GO:0016787	GO:GO:0016788	InterPro:IPR036514	InterPro:Lipase_GDSL_AS	UniProt:M4EQ45	PFAM:PF00657
ScanProsite:PS01098	PANTHER:PTHR22835	PANTHER:PTHR22835:SF301	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like	SUPFAM:SSF52266
UniParc:UPI0002545623	SEG:seg	:	:	:	:

Description

AT1G53990 (E=3e-141) GLIP3 | GLIP3; carboxylesterase/ lipase

Coordinates

chrA08:-:764300..767316

Molecular Weight (calculated)

40264.8 Da

IEP (calculated)

6.770

GRAVY (calculated)

-0.115

Length

363 amino acids

Sequence
(BLAST)

001: MFLYTIVLSI SSINCTEKNN NHVTNQVALF VFGDSLFDAG NYKYINNNTA FQSNFFPYGQ TTFKFPTGRV SDGRLITDFI AENAWLPLIP PNLQPSNSNN
101: QFTYGANFAF GGAGALVETF PGMVIDLGTQ LNSFKNVVRS LKSALGDAEA KTIFSRAVYL FYIGGDDLVY PLVANSSLFQ SNTKEKFVDF VIGNTTSVVE
201: EVYKIGGRKF GFLNTGAYEC APVISILDTT NIGSCSKPVA ELIYLYNKKF PDALRRLQHE LSGFRYALHD YHTSLLERIN NPSKYGFKEG KMGCCGSGPL
301: RGINTCGNQM GKSYELCENV TDYLFFDASH LTEKAHRQIA ELIWSGPPNV TGPYNLQALF ELN

Best Arabidopsis Sequence Match ( AT1G53990.1 )
(BLAST)

001: MVRLVLIIFF VYTIILSIGS INCIDNNNLV TNQAALFVFG DSLFDAGNNN YINTVSSFRS NIWPYGQTNF KFPTGRLSDG PEKAWLPSIP PNLQPNNGNN
101: QFTYGVSFAS AGAGALAESF LGMVINLGTQ LNNFKDVEKS LRSELGDAET KRVFSRAVYL FHIGANDYFY PFSANSSTFK SNSKEKFVDF VIGNITFVIE
201: EVYKMGGRKF GFLNVGPYEC SPNSLIRDRT KIGSCFKPVA ELIDMHNKKF PDVLRRLQRQ LSGFRYALHD YHTSLSERIN SPSKYGFKEG KKACCGSGPL
301: RGINTCGNRI GPSQGYGLCE NVTDYLFYDS SHLTEKAHRQ IAELIWNGPP NVTRPYNLKA LFELRLT

Arabidopsis Description

GLIP3GDSL esterase/lipase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.