Factsheet for Bra014372.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Bra024839.1-P	AT2G01950.1	19000166
AT1G54010.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	99.74	99.74
CDY30676	Canola	cytosol	62.5	94.49
Bra030915.1-P	Field mustard	extracellular	88.8	88.34
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	83.07	82.86
AT1G54010.1	Thale cress	extracellular	83.07	82.64
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	81.25	79.8
Bra030912.1-P	Field mustard	extracellular	81.51	70.34
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	69.79	69.97
Bra027359.1-P	Field mustard	extracellular	67.19	68.62
Bra027358.1-P	Field mustard	extracellular	68.75	68.04
Bra037957.1-P	Field mustard	extracellular	67.45	67.62
Bra030913.1-P	Field mustard	cytosol	43.75	60.0
Bra021542.1-P	Field mustard	vacuole	41.41	44.29
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	37.24	36.29
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	36.72	36.25
Bra030911.1-P	Field mustard	extracellular, vacuole	36.46	35.44
KRG97291	Soybean	extracellular	8.33	30.48
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	28.91	30.33
VIT_09s0002g00550.t01	Wine grape	extracellular	27.08	28.57
Bra027357.1-P	Field mustard	extracellular	27.6	28.42
PGSC0003DMT400016126	Potato	plasma membrane, vacuole	27.08	28.34
KRH13794	Soybean	nucleus	27.08	28.18
VIT_09s0002g00570.t01	Wine grape	extracellular	27.08	28.03
KRH47690	Soybean	extracellular, vacuole	26.56	27.87
Solyc11g051060.1.1	Tomato	vacuole	26.04	27.78
KRH69020	Soybean	extracellular	25.26	27.71
KRH13793	Soybean	nucleus	26.56	27.64
KRH07083	Soybean	extracellular	19.79	27.64
Solyc11g051100.1.1	Tomato	cytosol, extracellular	4.95	26.76
Bra030917.1-P	Field mustard	extracellular, vacuole	25.78	26.68
KRG94370	Soybean	extracellular	25.26	26.58
Bra007962.1-P	Field mustard	extracellular, vacuole	24.48	26.55
Solyc06g065010.2.1	Tomato	nucleus	25.0	26.52
PGSC0003DMT400016123	Potato	cytosol	5.99	26.44
Bra027356.1-P	Field mustard	extracellular	25.52	26.2
Bra030916.1-P	Field mustard	plastid	24.74	26.17
PGSC0003DMT400013272	Potato	extracellular, vacuole	24.74	25.89
Bra039701.1-P	Field mustard	extracellular, plasma membrane	21.61	25.86
Solyc06g064980.2.1	Tomato	extracellular	25.78	25.85
PGSC0003DMT400074599	Potato	cytosol	22.14	25.68
PGSC0003DMT400017106	Potato	extracellular	24.74	25.68
Bra014375.1-P	Field mustard	extracellular, vacuole	24.74	25.54
Solyc06g064960.2.1	Tomato	extracellular	24.22	25.41
Solyc04g028470.1.1	Tomato	cytosol	20.83	25.0
PGSC0003DMT400080416	Potato	golgi, vacuole	23.44	24.86
KRG97292	Soybean	extracellular	23.44	24.59
Solyc06g064990.2.1	Tomato	extracellular	24.22	24.03
KRH06260	Soybean	cytosol, peroxisome	16.41	23.16
Bra030918.1-P	Field mustard	plastid	18.49	22.83
Solyc01g109020.1.1	Tomato	extracellular	10.94	22.11
Solyc06g064970.2.1	Tomato	extracellular, vacuole	20.31	21.79
Solyc11g051120.1.1	Tomato	cytosol	8.07	21.38
Solyc11g021040.1.1	Tomato	extracellular	11.46	21.05

Protein Annotations

EnsemblPlants:Bra014372.1	EnsemblPlants:Bra014372.1-P	EnsemblPlantsGene:Bra014372	Gene3D:3.40.50.1110	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	GO:GO:0016788	InterPro:GDSL	InterPro:IPR036514	InterPro:SGNH_hydro_sf	InterPro:SGNH_plant_lipase_like
PANTHER:PTHR22835	PANTHER:PTHR22835:SF485	PFAM:PF00657	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52266
TMHMM:TMhelix	UniParc:UPI00025459D4	UniProt:M4DD05	MapMan:35.1	:	:

Description

AT1G54010 (E=3e-185) | myrosinase-associated protein, putative

Coordinates

chrA08:-:1325952..1328598

Molecular Weight (calculated)

42436.4 Da

IEP (calculated)

7.851

GRAVY (calculated)

-0.183

Length

384 amino acids

Sequence
(BLAST)

001: MAGNGSLATV LGLILVLTLF HNPITVAGQS IPAVALFTFG DSNFDAGNKQ SLTKANVPQG FWPYGKSRDD PNGKFSDGFI APDFVAKFMG IPIEIPAAMK
101: PNVNVSRGAS FAVADATLLG APVESLNLNQ QVRKFNQMKA SNWNDDFVKK SLFMIYIGAN DYLNFTKNNP IADASAQQAF VTSVTNKLKN DISLLYASGA
201: SKFVIQTLAP LGCLPIVRQD YNTGMDQCHE TLNNLAKQHN DKIGPMLNEM ARTAPGFQFT VFDFYNVILR RTQRSLNYRF LVTNSSCCGV GTHNAYGCGF
301: PNVHSKLCEY QRSYLFFDGR HNTEKAQESF GHLLFGADPN VIQPMNVREL VTYPVDEPMR EFWLPTTSSV RDSTSSSSHG YEFY

Best Arabidopsis Sequence Match ( AT1G54010.1 )
(BLAST)

001: MMAKNCNLVS VLCVFLVLTL FNKPITVAGQ NIPAVGLFTF GDSNFDAGNK QTLTKTLLPQ TFWPYGKSRD DPNGKFSDGL IAPDFLAKFM RIPIVIPPAL
101: QPNVNVSRGA SFAVADATLL GAPVESLTLN QQVRKFNQMK AANWNDDFVK KSVFMIYIGA NDYLNFTKNN PNADASTQQA FVTSVTNKLK NDISLLYSSG
201: ASKFVIQTLA PLGCLPIVRQ EFNTGMDQCY EKLNDLAKQH NEKIGPMLNE LARTAPASAP FQFTVFDFYN AILTRTQRNQ NFRFFVTNAS CCGVGTHDAY
301: GCGFPNVHSR LCEYQRSYLF FDGRHNTEKA QEMFGHLLFG ADTNVIQPMN IRELVVYPAD EPMRESWVPP TSATVQLRES RGYEYY

Arabidopsis Description

GLL23Inactive GDSL esterase/lipase-like protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4H8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.