Factsheet for Solyc11g021040.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g081170.1.1
Solyc01g109020.1.1
Solyc04g008430.1.1
Solyc04g028470.1.1
Solyc06g064960.2.1
Solyc06g064970.2.1
Solyc06g064980.2.1
Solyc06g064990.2.1
Solyc06g065010.2.1
Solyc11g021040.1.1
Solyc11g051060.1.1
Solyc11g051100.1.1
Solyc11g051120.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54010.1	Solyc04g008430.1.1	AT2G01950.1	19000166
AT1G54030.1	Solyc01g081170.1.1	AT1G52400.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54000.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54010.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc04g028470.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064960.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064970.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064980.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g064990.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc06g065010.2.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g021040.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051060.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051100.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc11g051120.1.1	AT1G54020.2	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G09260.1	23155454
AT1G54030.1	Solyc01g109020.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc04g028470.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064960.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064970.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064980.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g064990.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc06g065010.2.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g021040.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051060.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051100.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc11g051120.1.1	AT3G14210.1	23155454
AT1G54030.1	Solyc01g081170.1.1	AT3G21370.1	23155454
AT3G14220.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109020.1.1	Tomato	extracellular	87.56	96.32
KRG97291	Soybean	extracellular	27.27	54.29
Solyc06g064960.2.1	Tomato	extracellular	86.6	49.45
AT1G53970.2	Thale cress	cytosol	22.49	48.45
Solyc06g064970.2.1	Tomato	extracellular, vacuole	77.03	44.97
Solyc06g064990.2.1	Tomato	extracellular	80.38	43.41
Solyc06g065010.2.1	Tomato	nucleus	71.77	41.44
Solyc06g064980.2.1	Tomato	extracellular	71.77	39.16
Solyc11g051060.1.1	Tomato	vacuole	60.29	35.0
CDY71922	Canola	extracellular, plasma membrane	33.49	31.53
Bra039701.1-P	Field mustard	extracellular, plasma membrane	47.37	30.84
KRG97292	Soybean	extracellular	53.11	30.33
KRH07083	Soybean	extracellular	39.23	29.82
KRH69020	Soybean	extracellular	49.76	29.71
VIT_09s0002g00530.t01	Wine grape	cytosol	48.8	29.65
VIT_09s0002g00510.t01	Wine grape	extracellular	51.67	29.27
VIT_09s0002g00520.t01	Wine grape	extracellular	44.5	29.15
CDY02490	Canola	extracellular, vacuole	51.2	28.84
Bra030917.1-P	Field mustard	extracellular, vacuole	51.2	28.84
KRG94370	Soybean	extracellular	50.24	28.77
VIT_09s0002g00540.t01	Wine grape	extracellular	54.07	28.68
Solyc12g049550.1.1	Tomato	extracellular	49.76	28.49
CDY24064	Canola	plasma membrane	50.24	27.93
CDY30674	Canola	extracellular, vacuole	49.28	27.69
KRH13794	Soybean	nucleus	48.8	27.64
CDX98433	Canola	extracellular, vacuole	49.28	27.54
CDY36619	Canola	endoplasmic reticulum, plasma membrane	48.8	27.49
KRH13793	Soybean	nucleus	48.33	27.37
KRH47690	Soybean	extracellular, vacuole	47.37	27.05
CDX97558	Canola	extracellular	48.33	27.01
Bra027356.1-P	Field mustard	extracellular	48.33	27.01
Bra014375.1-P	Field mustard	extracellular, vacuole	47.85	26.88
Bra030916.1-P	Field mustard	plastid	46.41	26.72
VIT_09s0002g00550.t01	Wine grape	extracellular	45.93	26.37
CDY36617	Canola	plasma membrane	43.54	26.3
VIT_09s0002g00580.t01	Wine grape	endoplasmic reticulum, golgi	45.93	26.23
AT5G40990.1	Thale cress	plasma membrane	46.89	26.2
AT1G53940.2	Thale cress	plasma membrane	46.41	25.8
VIT_09s0002g00570.t01	Wine grape	extracellular	45.45	25.61
CDY54192	Canola	extracellular	15.79	24.63
Solyc11g051120.1.1	Tomato	cytosol	16.75	24.14
Solyc04g028470.1.1	Tomato	cytosol	36.84	24.06
AT1G53990.1	Thale cress	extracellular, plasma membrane	42.11	23.98
AT3G14225.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	42.11	23.34
KRH06260	Soybean	cytosol, peroxisome	29.67	22.79
CDX98432	Canola	extracellular	40.67	22.79
Bra027357.1-P	Field mustard	extracellular	40.67	22.79
CDX97557	Canola	extracellular	40.67	22.79
VIT_09s0002g00500.t01	Wine grape	cytosol	30.14	21.65
CDY69208	Canola	mitochondrion	28.71	19.23
CDY69407	Canola	extracellular	20.57	17.13
Solyc04g007570.1.1	Tomato	extracellular, plasma membrane, vacuole	28.71	16.44
CDX75755	Canola	plastid	33.01	16.08
CDY51411	Canola	endoplasmic reticulum, extracellular, vacuole	26.79	15.51
Bra037955.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	26.79	14.21
CDY61480	Canola	extracellular, vacuole	26.79	14.21
CDY33240	Canola	vacuole	24.4	14.21
CDY39106	Canola	vacuole	23.92	13.93
Bra021542.1-P	Field mustard	vacuole	23.92	13.93
Bra030911.1-P	Field mustard	extracellular, vacuole	26.32	13.92
CDY54197	Canola	extracellular, vacuole	26.32	13.92
Bra037957.1-P	Field mustard	extracellular	24.88	13.58
CDY36628	Canola	cytosol	24.4	13.32
CDX97555	Canola	extracellular	24.4	13.21
Bra014371.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	24.4	13.11
AT3G14220.1	Thale cress	vacuole	22.49	12.95
AT1G54020.2	Thale cress	endoplasmic reticulum	22.49	12.63
CDY30680	Canola	mitochondrion	24.4	12.62
Bra037954.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	22.97	12.53
CDY51412	Canola	cytosol	22.97	12.53
AT1G54000.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	23.45	12.53
Bra027359.1-P	Field mustard	extracellular	22.49	12.5
AT3G14210.1	Thale cress	extracellular, golgi	23.45	12.5
CDY30675	Canola	endoplasmic reticulum, vacuole	22.49	12.21
AT1G54010.1	Thale cress	extracellular	22.49	12.18
CDY08211	Canola	endoplasmic reticulum, vacuole	22.01	11.95
Bra014374.1-P	Field mustard	endoplasmic reticulum, vacuole	22.01	11.95
CDY36623	Canola	endoplasmic reticulum	21.53	11.75
CDY54588	Canola	extracellular	21.53	11.66
Bra030915.1-P	Field mustard	extracellular	21.53	11.66
CDY54591	Canola	extracellular	21.53	11.63
CDY54196	Canola	extracellular	21.53	11.57
AT1G54030.1	Thale cress	endoplasmic reticulum, nucleus, vacuole	22.97	11.51
Bra014372.1-P	Field mustard	extracellular	21.05	11.46
CDY08213	Canola	endoplasmic reticulum, extracellular, vacuole	21.05	11.46
CDX98428	Canola	extracellular, plasma membrane, vacuole	21.05	11.34
Bra027358.1-P	Field mustard	extracellular	20.57	11.08
CDX97556	Canola	extracellular	20.57	11.08
Bra030912.1-P	Field mustard	extracellular	21.53	10.11
CDY08214	Canola	cytosol	8.13	6.16
Bra030913.1-P	Field mustard	cytosol	8.13	6.07
CDY54194	Canola	cytosol	8.13	6.07
CDY30676	Canola	cytosol	4.78	3.94
CDY54198	Canola	cytosol	1.91	3.01
Solyc11g051100.1.1	Tomato	cytosol, extracellular	0.0	0.0
CDY51410	Canola	mitochondrion, plastid	0.0	0.0
CDY36625	Canola	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc11g021040.1.1	EnsemblPlantsGene:Solyc11g021040.1	Gene3D:3.40.50.1110	InterPro:IPR036514	InterPro:SGNH_hydro_sf	PANTHER:PTHR22835
PANTHER:PTHR22835:SF262	SignalP:SignalP-noTM	UniParc:UPI0002769664	UniProt:K4D754	MapMan:35.1	:

Description

No Description!

Coordinates

chr11:-:13256609..13257529

Molecular Weight (calculated)

23437.2 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.006

Length

209 amino acids

Sequence
(BLAST)

001: MALISSFCIF FLVAHFATPI VCIRNPINQT PALFVFSDSI FDPGNNNYIN TTTNFQANYL PYGESFFKYP TGRNSDGRLI PDFIAEYAKL PFIPPYFEIG
101: KKHLVHRVKF ASGGSGCLAE TARGFVIDLQ TQLKYFQNVG KLLQKKVGET ESKQILSNAV YIFSTINNDM VAPLFANSSF PYSDTEYLQM IMGNLTSVLK
201: GIYKEGGRK

Best Arabidopsis Sequence Match ( AT1G53920.1 )
(BLAST)

001: MRESTLMEKV TRRTISSFIF FIVSSTILFL AGKSSAKISH NGDNNVTALF LFGDSFLDAG NNNYINTTTL DQANFPPYGQ TFFGLPTGRF SDGRLISDFI
101: AEYANLPLIP PFLEPGNSQK KLYGVNFASA GAGALVETFQ GSVINLRTQL DHYKKVERLW RTNFGKEESK KRISRAVYLI SIGSNDYSSI FLTNQSLPIS
201: MSQHVDIVIG NLTTFIHEIY KIGGRKFGFL NVPDLGCFPA LRILQPKNDD SCLRDASRLA SMHNRALTNL LFQMQRQVKG FKFSLFDMNK SLRLRMQHPS
301: KFGFKEGEEA CCGTGKWRGV FSCGGKRIVK EYQLCENPKD YIFWDSLHLT QNTYNQFANL IWNGGHMSDS LVVGPYNINN LFQIP

Arabidopsis Description

GLIP5GLIP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WKF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.