Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14220.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT3G14220.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021542.1-P | Field mustard | vacuole | 99.44 | 99.44 |
| CDY33240 | Canola | vacuole | 96.94 | 96.94 |
| AT3G14220.1 | Thale cress | vacuole | 80.78 | 79.89 |
| CDY54591 | Canola | extracellular | 45.68 | 42.38 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 45.4 | 42.34 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 45.4 | 42.34 |
| CDY54588 | Canola | extracellular | 45.4 | 42.23 |
| CDY54196 | Canola | extracellular | 45.4 | 41.9 |
| CDY51412 | Canola | cytosol | 44.57 | 41.78 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 44.57 | 41.24 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.01 | 41.15 |
| CDY54192 | Canola | extracellular | 15.32 | 41.04 |
| CDX97556 | Canola | extracellular | 44.29 | 40.98 |
| CDY36623 | Canola | endoplasmic reticulum | 43.45 | 40.73 |
| CDY36628 | Canola | cytosol | 43.45 | 40.73 |
| CDX97555 | Canola | extracellular | 43.45 | 40.41 |
| CDY30676 | Canola | cytosol | 28.41 | 40.16 |
| CDY54194 | Canola | cytosol | 29.53 | 37.86 |
| CDY51410 | Canola | mitochondrion, plastid | 14.21 | 36.43 |
| CDY61480 | Canola | extracellular, vacuole | 38.16 | 34.77 |
| CDY54197 | Canola | extracellular, vacuole | 38.16 | 34.68 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.26 | 34.07 |
| CDY30680 | Canola | mitochondrion | 38.16 | 33.91 |
| KRG97291 | Soybean | extracellular | 9.47 | 32.38 |
| PGSC0003DMT400016123 | Potato | cytosol | 7.8 | 32.18 |
| CDY08214 | Canola | cytosol | 24.23 | 31.52 |
| CDY54198 | Canola | cytosol | 11.42 | 30.83 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 30.92 | 30.49 |
| KRH69020 | Soybean | extracellular | 28.97 | 29.71 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 30.64 | 29.65 |
| CDX97557 | Canola | extracellular | 30.36 | 29.22 |
| CDX98432 | Canola | extracellular | 30.36 | 29.22 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 29.53 | 28.96 |
| Solyc11g051060.1.1 | Tomato | vacuole | 28.97 | 28.89 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 29.25 | 28.61 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 10.31 | 28.24 |
| KRG94370 | Soybean | extracellular | 28.13 | 27.67 |
| KRH47690 | Soybean | extracellular, vacuole | 27.86 | 27.32 |
| Solyc06g064960.2.1 | Tomato | extracellular | 27.86 | 27.32 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 28.13 | 27.22 |
| CDX97558 | Canola | extracellular | 28.13 | 27.01 |
| CDX98433 | Canola | extracellular, vacuole | 28.13 | 27.01 |
| KRH07083 | Soybean | extracellular | 20.61 | 26.91 |
| PGSC0003DMT400074599 | Potato | cytosol | 24.79 | 26.89 |
| Solyc04g028470.1.1 | Tomato | cytosol | 23.96 | 26.88 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 27.3 | 26.7 |
| CDY02490 | Canola | extracellular, vacuole | 27.58 | 26.68 |
| KRH13794 | Soybean | nucleus | 27.3 | 26.56 |
| Solyc06g064980.2.1 | Tomato | extracellular | 28.13 | 26.37 |
| CDY24064 | Canola | plasma membrane | 27.58 | 26.33 |
| CDY36617 | Canola | plasma membrane | 25.35 | 26.3 |
| KRH13793 | Soybean | nucleus | 26.74 | 26.02 |
| Solyc06g064990.2.1 | Tomato | extracellular | 27.86 | 25.84 |
| Solyc06g065010.2.1 | Tomato | nucleus | 25.91 | 25.69 |
| KRG97292 | Soybean | extracellular | 26.18 | 25.68 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 5.01 | 25.35 |
| CDY30674 | Canola | extracellular, vacuole | 26.18 | 25.27 |
| Solyc01g109020.1.1 | Tomato | extracellular | 13.37 | 25.26 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 25.35 | 25.14 |
| CDY69407 | Canola | extracellular | 17.55 | 25.1 |
| PGSC0003DMT400017106 | Potato | extracellular | 25.35 | 24.59 |
| CDY25680 | Canola | extracellular, plasma membrane | 11.42 | 24.55 |
| CDY02491 | Canola | plastid | 11.42 | 24.12 |
| Solyc11g021040.1.1 | Tomato | extracellular | 13.93 | 23.92 |
| CDY69208 | Canola | mitochondrion | 20.33 | 23.4 |
| KRH06260 | Soybean | cytosol, peroxisome | 17.55 | 23.16 |
| CDY71922 | Canola | extracellular, plasma membrane | 13.93 | 22.52 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 21.73 | 21.79 |
| Solyc11g051120.1.1 | Tomato | cytosol | 8.08 | 20.0 |
| CDY36625 | Canola | extracellular | 7.52 | 19.85 |
| CDX75755 | Canola | plastid | 21.73 | 18.18 |
Protein Annotations
| EnsemblPlants:CDY39106 | EnsemblPlantsGene:GSBRNA2T00067261001 | Gene3D:3.40.50.1110 | GO:A0A078HNE1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | PFAM:PF00657 | ProteinID:CDY39106 | ProteinID:CDY39106.1 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EED0BA | UniProt:A0A078HNE1 | MapMan:35.1 | : |
Description
BnaA01g29500DBnaA01g29500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNE1]
Coordinates
chrLK032440:+:156231..157765
Molecular Weight (calculated)
39649.2 Da
IEP (calculated)
7.530
GRAVY (calculated)
-0.138
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MAINRNLIIF AGLLASFSLA SFPANVAGEP PLLFTFGDSS YDVGNTKFFS SAFDPATTWP YGESIDFPTG RWSDGNIVPD FVGRLVGNHE PVPPVLDPKA
101: DLSRGASFAI SGATVLGSPS DTMSFGQQIL KFIELHKKWS DKERAEAIYM INIGADDYLN FAKAHPNANP VEQVAFVARV LQKLSRDLMS LYKSGGARKL
201: AVQNLGPLGC LPIVRQEFKT GESCMEMVNF MVKTHNERLG PVLFAMTVRF RSLRYSVFDF NGEIFRRINE PSRHGYTDTT TSCCGTGSRN AFGCGYSNVH
301: SKLCSYQKGF LFFDGRHNTE KTDEEIANLF YAGDRHVVSP VNIRDLVGKS VTFLPAQEI
101: DLSRGASFAI SGATVLGSPS DTMSFGQQIL KFIELHKKWS DKERAEAIYM INIGADDYLN FAKAHPNANP VEQVAFVARV LQKLSRDLMS LYKSGGARKL
201: AVQNLGPLGC LPIVRQEFKT GESCMEMVNF MVKTHNERLG PVLFAMTVRF RSLRYSVFDF NGEIFRRINE PSRHGYTDTT TSCCGTGSRN AFGCGYSNVH
301: SKLCSYQKGF LFFDGRHNTE KTDEEIANLF YAGDRHVVSP VNIRDLVGKS VTFLPAQEI
001: MAKNRNLVFF LGVLASFTLS SFPVTVSGEP PILFTFGDSS YDVGNTKFFS SEFDPATTWP YGDSIDDPSG RWSDGHIVPD FVGRLIGHRE PIPPVLDPKA
101: DLSRGASFAI AGAVVLGSQS TTASMNFGQQ ISKFLELHKQ WTDKERAEAI YMVNIGAEDY LNFAKAHPNA NTVEQLTQVA HVLQRIPREL TSLYRAGGAR
201: KFAVQNLGPL GCLPIVRQEF KTGENCMEMV NFMVKTHNER LSRLLVAITV PLLYRGFRYS LFDFNGEILR RINEPSLHGY TDTTTSCCGT GSRNAYGCGY
301: SNVHAKLCSY QKSFLFFDGR HNTEKTDEEV ANLFYSGDKH VVSPMNIKDL VGKAATDLLA QEI
101: DLSRGASFAI AGAVVLGSQS TTASMNFGQQ ISKFLELHKQ WTDKERAEAI YMVNIGAEDY LNFAKAHPNA NTVEQLTQVA HVLQRIPREL TSLYRAGGAR
201: KFAVQNLGPL GCLPIVRQEF KTGENCMEMV NFMVKTHNER LSRLLVAITV PLLYRGFRYS LFDFNGEILR RINEPSLHGY TDTTTSCCGT GSRNAYGCGY
301: SNVHAKLCSY QKSFLFFDGR HNTEKTDEEV ANLFYSGDKH VVSPMNIKDL VGKAATDLLA QEI
Arabidopsis Description
GDSL esterase/lipase At3g14220 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJP2]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.