Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030911.1-P | Field mustard | extracellular, vacuole | 99.75 | 99.75 |
| CDY61480 | Canola | extracellular, vacuole | 97.22 | 97.46 |
| CDY08214 | Canola | cytosol | 60.51 | 86.59 |
| CDY36625 | Canola | extracellular | 29.37 | 85.29 |
| CDY30680 | Canola | mitochondrion | 86.33 | 84.41 |
| CDY51411 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.96 | 84.21 |
| AT1G54030.1 | Thale cress | endoplasmic reticulum, nucleus, vacuole | 78.73 | 74.58 |
| CDY54192 | Canola | extracellular | 14.18 | 41.79 |
| CDY39106 | Canola | vacuole | 34.68 | 38.16 |
| CDY08211 | Canola | endoplasmic reticulum, vacuole | 36.96 | 37.92 |
| CDY33240 | Canola | vacuole | 34.43 | 37.88 |
| CDY30675 | Canola | endoplasmic reticulum, vacuole | 36.71 | 37.66 |
| CDY54591 | Canola | extracellular | 36.46 | 37.21 |
| PGSC0003DMT400016123 | Potato | cytosol | 8.1 | 36.78 |
| CDY08213 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.44 | 36.46 |
| CDY54588 | Canola | extracellular | 34.94 | 35.75 |
| CDY54196 | Canola | extracellular | 35.19 | 35.73 |
| CDX97555 | Canola | extracellular | 34.18 | 34.97 |
| CDY51412 | Canola | cytosol | 33.67 | 34.73 |
| CDY36628 | Canola | cytosol | 33.67 | 34.73 |
| CDX98428 | Canola | extracellular, plasma membrane, vacuole | 33.92 | 34.54 |
| CDY36623 | Canola | endoplasmic reticulum | 33.16 | 34.2 |
| CDX97556 | Canola | extracellular | 33.16 | 33.76 |
| KRH69020 | Soybean | extracellular | 29.62 | 33.43 |
| VIT_09s0002g00580.t01 | Wine grape | endoplasmic reticulum, golgi | 30.89 | 33.33 |
| VIT_09s0002g00550.t01 | Wine grape | extracellular | 30.38 | 32.97 |
| CDY36619 | Canola | endoplasmic reticulum, plasma membrane | 30.89 | 32.88 |
| KRG94370 | Soybean | extracellular | 30.38 | 32.88 |
| KRH13794 | Soybean | nucleus | 30.63 | 32.79 |
| CDY30676 | Canola | cytosol | 21.01 | 32.68 |
| Solyc11g051060.1.1 | Tomato | vacuole | 29.62 | 32.5 |
| KRG97291 | Soybean | extracellular | 8.61 | 32.38 |
| PGSC0003DMT400016126 | Potato | plasma membrane, vacuole | 29.87 | 32.15 |
| CDY51410 | Canola | mitochondrion, plastid | 11.39 | 32.14 |
| KRH13793 | Soybean | nucleus | 29.87 | 31.98 |
| KRH47690 | Soybean | extracellular, vacuole | 29.62 | 31.97 |
| CDY24064 | Canola | plasma membrane | 30.13 | 31.65 |
| CDX97557 | Canola | extracellular | 29.87 | 31.64 |
| CDX98432 | Canola | extracellular | 29.87 | 31.64 |
| CDY02490 | Canola | extracellular, vacuole | 29.62 | 31.54 |
| CDY54194 | Canola | cytosol | 22.28 | 31.43 |
| CDY09515 | Canola | endoplasmic reticulum, extracellular, golgi | 10.38 | 31.3 |
| CDY30674 | Canola | extracellular, vacuole | 29.37 | 31.18 |
| CDY69407 | Canola | extracellular | 19.75 | 31.08 |
| CDY36617 | Canola | plasma membrane | 27.09 | 30.92 |
| KRH07083 | Soybean | extracellular | 21.52 | 30.91 |
| PGSC0003DMT400080416 | Potato | golgi, vacuole | 28.1 | 30.66 |
| VIT_09s0002g00570.t01 | Wine grape | extracellular | 28.61 | 30.46 |
| CDX97558 | Canola | extracellular | 28.61 | 30.21 |
| CDX98433 | Canola | extracellular, vacuole | 28.61 | 30.21 |
| KRG97292 | Soybean | extracellular | 27.85 | 30.05 |
| Solyc04g028470.1.1 | Tomato | cytosol | 24.3 | 30.0 |
| Solyc06g065010.2.1 | Tomato | nucleus | 27.34 | 29.83 |
| CDY69208 | Canola | mitochondrion | 23.54 | 29.81 |
| Solyc06g064960.2.1 | Tomato | extracellular | 27.59 | 29.78 |
| PGSC0003DMT400074599 | Potato | cytosol | 24.81 | 29.61 |
| Solyc11g051100.1.1 | Tomato | cytosol, extracellular | 5.32 | 29.58 |
| PGSC0003DMT400013272 | Potato | extracellular, vacuole | 27.34 | 29.43 |
| Solyc06g064990.2.1 | Tomato | extracellular | 28.61 | 29.2 |
| Solyc01g109020.1.1 | Tomato | extracellular | 13.92 | 28.95 |
| PGSC0003DMT400017106 | Potato | extracellular | 27.09 | 28.92 |
| CDY25680 | Canola | extracellular, plasma membrane | 12.15 | 28.74 |
| Solyc06g064980.2.1 | Tomato | extracellular | 27.59 | 28.46 |
| CDY02491 | Canola | plastid | 12.15 | 28.24 |
| KRH06260 | Soybean | cytosol, peroxisome | 18.99 | 27.57 |
| Solyc11g021040.1.1 | Tomato | extracellular | 13.92 | 26.32 |
| CDY71922 | Canola | extracellular, plasma membrane | 14.68 | 26.13 |
| Solyc11g051120.1.1 | Tomato | cytosol | 9.11 | 24.83 |
| CDY54198 | Canola | cytosol | 8.35 | 24.81 |
| Solyc06g064970.2.1 | Tomato | extracellular, vacuole | 22.28 | 24.58 |
| CDX75755 | Canola | plastid | 21.01 | 19.35 |
Protein Annotations
| EnsemblPlants:CDY54197 | EnsemblPlantsGene:GSBRNA2T00013587001 | Gene3D:3.40.50.1110 | GO:A0A078IW16 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | GO:GO:0016788 | InterPro:GDSL | InterPro:IPR036514 | InterPro:SGNH_hydro_sf | InterPro:SGNH_plant_lipase_like |
| PANTHER:PTHR22835 | PANTHER:PTHR22835:SF461 | PFAM:PF00657 | ProteinID:CDY54197 | ProteinID:CDY54197.1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0004EE8F92 | UniProt:A0A078IW16 | MapMan:35.1 | : | : |
Description
BnaA08g29200DBnaA08g29200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW16]
Coordinates
chrLK033290:+:56596..58867
Molecular Weight (calculated)
43559.2 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.086
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPTPHLFS LSFLSLLLLP HFPTVSLAQT LFVFGDGLYD AGNKQFVSSN RVDASFPPYG MTVGEPTGRW SDGRIVPDYL ASFMGVPHIP PILNGTADFS
101: HGANFAIADA TVLGSPPETL TFSQQVIKFS DNKNKWSAQA RSEAVYLFYI GSDDYLKFAK NNPNPSDDQK QAFVDRVITA IEAELKVIYG TGGRKFALHN
201: LAPLGCLPAV KQANGNVQEC VKLPSEMAEL HNKKLLQLLV ELSRQLSGFQ YSFYDFFSSI KHRVIKSKTY TFETGMAACC GTGSVNGTSC STNNVCSKPE
301: DYLFFDGKHL TQEGNLQVGH LMWGADPVVV GPNNLRELLF LPLNTTVMLA DIQEAMAAMS PKQNKIESLY DIKMMESEME NQWLYQVGKA VSFLI
101: HGANFAIADA TVLGSPPETL TFSQQVIKFS DNKNKWSAQA RSEAVYLFYI GSDDYLKFAK NNPNPSDDQK QAFVDRVITA IEAELKVIYG TGGRKFALHN
201: LAPLGCLPAV KQANGNVQEC VKLPSEMAEL HNKKLLQLLV ELSRQLSGFQ YSFYDFFSSI KHRVIKSKTY TFETGMAACC GTGSVNGTSC STNNVCSKPE
301: DYLFFDGKHL TQEGNLQVGH LMWGADPVVV GPNNLRELLF LPLNTTVMLA DIQEAMAAMS PKQNKIESLY DIKMMESEME NQWLYQVGKA VSFLI
001: MLLIPSFTAN SNEPPPSKLS LSDLSMAILK SHFFLLFPLL LLHFHTVSFA QTLFVFGDGL YDAGNKQFLS QNRVDASFPP YGVTVGQATG RWSDGSIVPD
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
101: YLAKFMGIPK ISPILLTTAD FSHGANFAIA DATVLGSPPE TMTLSQQVKK FSENKNKWTN QTRSEAIYLI YIGSDDYLSY AKSNPSPSDT QKQAFVDQVI
201: TTIKAEIKVV YGSGGRKFAF QNLAPLGCLP AVKQASGNVQ ECVKLPSEMA ALHNKKLLQL LVELSRELNG FQYSFYDFFS SIQNRVIKSK TYTFETGNAA
301: CCGTGSINGS NCSAKNVCAK PEEYIFFDGK HLTQEANLQV GHLMWGADPE VIGPNNIREL MVLPLDITVI LAGIQEAMAA MRPRQSNIES LYDIKKMESE
401: MDNHWLYQVD KAISFMI
Arabidopsis Description
MVP1Inactive GDSL esterase/lipase-like protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA74]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
SUBAcon: [vacuole,endoplasmic reticulum,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.