Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 98.43 | 98.43 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 74.28 | 75.07 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 74.02 | 74.41 |
| CDY50084 | Canola | extracellular, vacuole | 69.29 | 69.11 |
| CDY43081 | Canola | extracellular, vacuole | 69.03 | 68.85 |
| CDY29822 | Canola | vacuole | 69.29 | 65.51 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 75.07 | 65.0 |
| CDX82249 | Canola | plasma membrane, vacuole | 64.04 | 63.71 |
| CDY25415 | Canola | vacuole | 67.19 | 63.37 |
| CDX83143 | Canola | cytosol | 52.76 | 62.81 |
| CDX82251 | Canola | extracellular, golgi | 65.62 | 62.66 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 62.2 | 61.56 |
| CDX82252 | Canola | plastid | 55.38 | 58.77 |
| CDY36041 | Canola | plasma membrane | 54.33 | 58.15 |
| CDY36040 | Canola | extracellular | 56.69 | 57.14 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 55.64 | 56.53 |
| CDY34004 | Canola | cytosol | 41.73 | 53.0 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 43.83 | 50.61 |
| CDY70350 | Canola | plastid | 20.47 | 45.61 |
| CDY70349 | Canola | cytosol | 31.23 | 45.08 |
| CDY44083 | Canola | cytosol | 36.22 | 43.81 |
| CDY04288 | Canola | cytosol | 16.01 | 43.57 |
| CDX99123 | Canola | cytosol | 21.26 | 42.19 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 56.69 | 42.02 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 33.07 | 40.91 |
| CDY07338 | Canola | plastid | 32.28 | 40.73 |
| CDY39500 | Canola | cytosol | 33.86 | 40.31 |
| CDY57407 | Canola | cytosol | 32.55 | 40.0 |
| CDY04290 | Canola | extracellular | 26.77 | 39.69 |
| CDY28571 | Canola | cytosol | 23.1 | 38.94 |
| CDY07340 | Canola | plastid | 32.55 | 38.87 |
| CDY28575 | Canola | golgi | 30.97 | 38.69 |
| CDY04283 | Canola | plastid | 32.28 | 38.56 |
| CDX95908 | Canola | plastid | 36.22 | 37.7 |
| CDX81648 | Canola | plastid | 27.56 | 36.71 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 34.38 | 35.31 |
| CDX74582 | Canola | extracellular, golgi, plastid | 34.65 | 35.29 |
| CDX82371 | Canola | cytosol | 27.03 | 33.33 |
| CDY19307 | Canola | cytosol | 33.6 | 32.99 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.18 | 32.86 |
| CDX86065 | Canola | cytosol | 27.03 | 32.7 |
| CDX80557 | Canola | extracellular | 29.66 | 32.29 |
| CDX87055 | Canola | golgi, plasma membrane | 28.08 | 32.13 |
| CDY44084 | Canola | cytosol | 35.17 | 31.75 |
| CDX75913 | Canola | cytosol | 25.72 | 31.72 |
| CDY67361 | Canola | vacuole | 29.13 | 31.71 |
| CDY24977 | Canola | extracellular | 28.87 | 31.34 |
| CDX88229 | Canola | extracellular | 28.61 | 31.14 |
| CDY05532 | Canola | extracellular | 28.61 | 31.05 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 28.08 | 30.92 |
| KRH68153 | Soybean | cytosol | 25.2 | 30.77 |
| CDY05531 | Canola | cytosol | 24.15 | 30.77 |
| CDY19775 | Canola | extracellular | 28.08 | 30.57 |
| CDX87054 | Canola | extracellular | 28.08 | 30.57 |
| CDY05324 | Canola | cytosol | 23.88 | 30.33 |
| CDX87056 | Canola | extracellular | 27.3 | 30.32 |
| CDY19777 | Canola | extracellular | 27.3 | 30.23 |
| CDY70520 | Canola | vacuole | 26.25 | 30.12 |
| CDX81956 | Canola | extracellular | 23.36 | 28.99 |
| CDX74378 | Canola | cytosol | 21.26 | 28.22 |
| CDY29329 | Canola | plasma membrane | 34.65 | 28.03 |
| CDX91854 | Canola | cytosol | 21.78 | 27.95 |
| CDY46265 | Canola | plasma membrane | 34.38 | 27.87 |
| CDY36039 | Canola | vacuole | 64.3 | 26.6 |
| CDY07146 | Canola | cytosol | 20.47 | 26.44 |
| CDY51713 | Canola | cytosol | 19.42 | 25.08 |
| CDY37377 | Canola | cytosol, plastid | 31.23 | 24.29 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.34 | 23.74 |
| CDX79503 | Canola | cytosol | 18.37 | 22.95 |
| CDY07196 | Canola | cytosol | 17.85 | 22.9 |
| CDX84705 | Canola | cytosol | 18.37 | 22.88 |
| CDY48522 | Canola | cytosol | 15.75 | 21.51 |
| CDY23783 | Canola | cytosol | 16.8 | 20.78 |
| CDY12160 | Canola | cytosol | 16.01 | 19.61 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 13.65 | 18.06 |
Protein Annotations
| EnsemblPlants:CDY43080 | EnsemblPlantsGene:GSBRNA2T00075932001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY43080 | ProteinID:CDY43080.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EE7EF1 | UniProt:A0A078HX82 | MapMan:35.2 | : |
Description
BnaCnng10860DBnaCnng10860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX82]
Coordinates
chrLK032544:-:202008..203934
Molecular Weight (calculated)
43622.1 Da
IEP (calculated)
6.887
GRAVY (calculated)
-0.451
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MISHYRNTIS AVYLLVCIFI TSSSASSILR QFTDDFNTNL QQENGAGPNP NVGEADHLHQ HQEISSRDHK VSVSSTVNGL RDRPPSSYSL KMESFNKLLN
101: SPYTERYQSR PFTVGGYNWT LMVYPNGNKK DSGSGYLSLY VAIDNSTLVA GQQEVYADLR FYVFNNNERK YFTIQDTNVW RFNVFKTMWG FSQVLPVATF
201: KDPKNGYLYD GDHCEFGVDV TIPTTYQVSE LFSIADNFYN PKFTWTIRGF STLFKDTYYS DLFSIGGRTW TIQVNPSGRG TGAGKALSMY LNLDVNEKLR
301: PYEKIYVRGK LRVLNQRGLN NIERQLDIWY QGPGYGEYSW GYHEFISFSD LRDSAKGFVV NDVLMVQAEL EDISSTKYLP N
101: SPYTERYQSR PFTVGGYNWT LMVYPNGNKK DSGSGYLSLY VAIDNSTLVA GQQEVYADLR FYVFNNNERK YFTIQDTNVW RFNVFKTMWG FSQVLPVATF
201: KDPKNGYLYD GDHCEFGVDV TIPTTYQVSE LFSIADNFYN PKFTWTIRGF STLFKDTYYS DLFSIGGRTW TIQVNPSGRG TGAGKALSMY LNLDVNEKLR
301: PYEKIYVRGK LRVLNQRGLN NIERQLDIWY QGPGYGEYSW GYHEFISFSD LRDSAKGFVV NDVLMVQAEL EDISSTKYLP N
001: MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
101: STYTEKYVSR PFSVGGYNWT LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF SVFKTMWGFS QVLPIDTFKD
201: PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY
301: EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND VLMVQVEMEA ISSTKYFPS
Arabidopsis Description
AT3g20370/MQC12_13 [Source:UniProtKB/TrEMBL;Acc:Q9LTQ5]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.