Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007874.1-P | Field mustard | cytosol | 85.07 | 89.75 |
| CDY44083 | Canola | cytosol | 55.92 | 74.92 |
| CDY07338 | Canola | plastid | 49.29 | 68.87 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 50.24 | 68.83 |
| CDY28575 | Canola | golgi | 49.53 | 68.52 |
| CDY70350 | Canola | plastid | 27.73 | 68.42 |
| CDY28571 | Canola | cytosol | 36.49 | 68.14 |
| CDY04290 | Canola | extracellular | 40.76 | 66.93 |
| CDY70349 | Canola | cytosol | 41.71 | 66.67 |
| CDY04283 | Canola | plastid | 48.34 | 63.95 |
| CDY04288 | Canola | cytosol | 21.09 | 63.57 |
| CDY07340 | Canola | plastid | 47.63 | 63.01 |
| CDX95908 | Canola | plastid | 53.32 | 61.48 |
| CDX81648 | Canola | plastid | 40.52 | 59.79 |
| CDY57407 | Canola | cytosol | 38.86 | 52.9 |
| CDY39500 | Canola | cytosol | 37.68 | 49.69 |
| CDY19307 | Canola | cytosol | 38.39 | 41.75 |
| CDX83143 | Canola | cytosol | 29.15 | 38.44 |
| CDY36041 | Canola | plasma membrane | 31.28 | 37.08 |
| CDX82252 | Canola | plastid | 30.57 | 35.93 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 31.75 | 35.17 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 31.75 | 35.17 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 31.28 | 35.01 |
| CDY43081 | Canola | extracellular, vacuole | 31.28 | 34.55 |
| CDY50084 | Canola | extracellular, vacuole | 30.81 | 34.03 |
| CDX99123 | Canola | cytosol | 15.17 | 33.33 |
| CDX82249 | Canola | plasma membrane, vacuole | 29.38 | 32.38 |
| CDY37377 | Canola | cytosol, plastid | 37.2 | 32.04 |
| CDY34004 | Canola | cytosol | 22.75 | 32.0 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 28.91 | 31.69 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 27.73 | 31.54 |
| CDY25415 | Canola | vacuole | 30.09 | 31.44 |
| KRH68153 | Soybean | cytosol | 23.22 | 31.41 |
| CDX82251 | Canola | extracellular, golgi | 29.38 | 31.08 |
| CDY29822 | Canola | vacuole | 29.62 | 31.02 |
| CDX75913 | Canola | cytosol | 22.04 | 30.1 |
| CDX82371 | Canola | cytosol | 22.04 | 30.1 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 31.28 | 30.0 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.64 | 27.81 |
| CDY05531 | Canola | cytosol | 18.96 | 26.76 |
| CDY36040 | Canola | extracellular | 23.93 | 26.72 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 20.62 | 26.36 |
| CDY05324 | Canola | cytosol | 18.72 | 26.33 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 21.56 | 26.0 |
| CDY67361 | Canola | vacuole | 21.33 | 25.71 |
| CDX87054 | Canola | extracellular | 21.33 | 25.71 |
| CDY19775 | Canola | extracellular | 21.09 | 25.43 |
| CDX80557 | Canola | extracellular | 21.09 | 25.43 |
| CDX87055 | Canola | golgi, plasma membrane | 19.91 | 25.23 |
| CDX88229 | Canola | extracellular | 20.85 | 25.14 |
| CDY48522 | Canola | cytosol | 16.59 | 25.09 |
| CDY07146 | Canola | cytosol | 17.54 | 25.08 |
| CDY07196 | Canola | cytosol | 17.54 | 24.92 |
| CDY24977 | Canola | extracellular | 20.62 | 24.79 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 30.09 | 24.71 |
| CDY05532 | Canola | extracellular | 20.38 | 24.5 |
| CDX86065 | Canola | cytosol | 18.25 | 24.44 |
| CDY51713 | Canola | cytosol | 17.06 | 24.41 |
| CDX91854 | Canola | cytosol | 17.06 | 24.24 |
| CDX81956 | Canola | extracellular | 17.54 | 24.1 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 19.67 | 23.99 |
| CDX87056 | Canola | extracellular | 19.43 | 23.91 |
| CDY19777 | Canola | extracellular | 19.43 | 23.84 |
| CDX74378 | Canola | cytosol | 16.11 | 23.69 |
| CDY70520 | Canola | vacuole | 18.25 | 23.19 |
| CDY29329 | Canola | plasma membrane | 25.83 | 23.14 |
| CDY46265 | Canola | plasma membrane | 25.59 | 22.98 |
| CDX79503 | Canola | cytosol | 16.11 | 22.3 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 10.43 | 22.22 |
| CDX84705 | Canola | cytosol | 16.11 | 22.22 |
| CDY12160 | Canola | cytosol | 15.4 | 20.9 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 13.74 | 20.14 |
| CDY23783 | Canola | cytosol | 14.46 | 19.81 |
| CDY36039 | Canola | vacuole | 31.99 | 14.66 |
Protein Annotations
| EnsemblPlants:CDY44084 | EnsemblPlantsGene:GSBRNA2T00079508001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY44084 | ProteinID:CDY44084.1 | SMART:SM00061 | SUPFAM:SSF49599 |
| UniParc:UPI0004EDFF3C | UniProt:A0A078I3E1 | MapMan:35.2 | : | : | : |
Description
BnaA02g14480DBnaA02g14480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3E1]
Coordinates
chrLK032578:-:163676..166639
Molecular Weight (calculated)
48532.5 Da
IEP (calculated)
7.561
GRAVY (calculated)
-0.505
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSEIVST IVKKWREHPP SSYSLKVDNF KQLEKSTTSS DDKYQSRLFS SGGYNWKLIV YPQGNKKDNG EGFISMYVEI DSESLTSTPQ CDVFAELIFF
101: VYNKKENKYF TIQDVEVKRF NALKKIWGLQ QVLPSDAFNK LENGYIFEGD QCEFGVEVIS PLGDALTKWE ILSFNEKLED PKFSWTVEKY SQLKEDKYIS
201: NTFSMGAWKW VLWLYLKGDS RADGKWLSLY LLLADSDKPK AGEKIFVQAN FRVLDPLGSN HFEIKMSHWY NYMNLGWGWN KLLSLAELRK SYLDKEDALN
301: VEIEFEVACG DSHYQQLLSD SGRTMLHFRW RKVVVQSQLL VSAGKGRPMH ERAELLSRPG GGLWNSARIV PSSFGSPLVD YYSKYHRTPN RKKLSTEEYE
401: QLTQETARKA MAGLAACPGF GD
101: VYNKKENKYF TIQDVEVKRF NALKKIWGLQ QVLPSDAFNK LENGYIFEGD QCEFGVEVIS PLGDALTKWE ILSFNEKLED PKFSWTVEKY SQLKEDKYIS
201: NTFSMGAWKW VLWLYLKGDS RADGKWLSLY LLLADSDKPK AGEKIFVQAN FRVLDPLGSN HFEIKMSHWY NYMNLGWGWN KLLSLAELRK SYLDKEDALN
301: VEIEFEVACG DSHYQQLLSD SGRTMLHFRW RKVVVQSQLL VSAGKGRPMH ERAELLSRPG GGLWNSARIV PSSFGSPLVD YYSKYHRTPN RKKLSTEEYE
401: QLTQETARKA MAGLAACPGF GD
001: MMCSSVSSTT LRSWRERTPN SYSLKLQNIS QVEKSTLFSD GKYQSRLFSS GGYNWRMIIY PKGNRKDDGS GFISMYVEID STSLLTTPTT EVFADLRFFV
101: FNKKENKYYT IQHVESKLFN AFRTIWGLAQ VLPVDTFTDP KNGYIFEGDQ CEFGVDVIVA APPTNWEIHT LHEALSQPKF FWTVKNFSEL NNNVYTSGNF
201: SMRERKWVLK LYPKGDVKGD RKWLSLYLYL DQSETLKESE KIFVQAQLRV LDPRGSNHVT HKISSWYTSS NTAWGYRKFV SLAEIPKAYL DKDTLKVQID
301: VEVVSEAEFS PSMI
101: FNKKENKYYT IQHVESKLFN AFRTIWGLAQ VLPVDTFTDP KNGYIFEGDQ CEFGVDVIVA APPTNWEIHT LHEALSQPKF FWTVKNFSEL NNNVYTSGNF
201: SMRERKWVLK LYPKGDVKGD RKWLSLYLYL DQSETLKESE KIFVQAQLRV LDPRGSNHVT HKISSWYTSS NTAWGYRKFV SLAEIPKAYL DKDTLKVQID
301: VEVVSEAEFS PSMI
Arabidopsis Description
Ubiquitin carboxyl-terminal hydrolase-like protein [Source:UniProtKB/TrEMBL;Acc:F4IYY5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.