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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67101 Canola endoplasmic reticulum, extracellular, vacuole 97.14 97.14
CDY70520 Canola vacuole 87.43 92.17
CDY67361 Canola vacuole 90.29 90.29
CDX88229 Canola extracellular 88.86 88.86
CDX81956 Canola extracellular 76.29 86.97
CDX87054 Canola extracellular 86.86 86.86
CDY19775 Canola extracellular 86.0 86.0
CDY05532 Canola extracellular 84.57 84.33
CDY24977 Canola extracellular 84.57 84.33
CDY05531 Canola cytosol 69.71 81.61
CDY05324 Canola cytosol 66.86 78.0
AT5G26320.1 Thale cress vacuole 72.0 71.59
CDX87056 Canola extracellular 69.14 70.55
CDY19777 Canola extracellular 69.14 70.35
CDX87055 Canola golgi, plasma membrane 65.43 68.77
CDY19776 Canola extracellular, plasma membrane, vacuole 67.71 68.5
CDY04288 Canola cytosol 13.43 33.57
CDY70350 Canola plastid 15.71 32.16
CDX99123 Canola cytosol 17.14 31.25
CDX82246 Canola endoplasmic reticulum, extracellular 32.29 29.97
CDY70349 Canola cytosol 22.57 29.92
CDY43081 Canola extracellular, vacuole 32.57 29.84
KRH68153 Soybean cytosol 26.57 29.81
CDY43080 Canola endoplasmic reticulum, vacuole 32.29 29.66
CDY50084 Canola extracellular, vacuole 32.29 29.58
CDY50083 Canola endoplasmic reticulum, vacuole 32.0 29.4
CDX83143 Canola cytosol 26.86 29.38
CDX75913 Canola cytosol 25.71 29.13
CDX82371 Canola cytosol 25.71 29.13
CDX82252 Canola plastid 29.71 28.97
CDY36041 Canola plasma membrane 29.43 28.93
CDY44083 Canola cytosol 26.0 28.89
CDY04290 Canola extracellular 20.29 27.63
CDX82249 Canola plasma membrane, vacuole 30.0 27.42
CDY58708 Canola cytosol, nucleus, plastid 24.0 27.27
CDY07338 Canola plastid 23.14 26.82
CDX82251 Canola extracellular, golgi 30.57 26.82
CDY07146 Canola cytosol 22.57 26.78
CDY50282 Canola endoplasmic reticulum, vacuole 29.14 26.49
CDY25415 Canola vacuole 30.57 26.49
CDY36040 Canola extracellular 28.57 26.45
CDY29822 Canola vacuole 30.29 26.3
CDY23783 Canola cytosol 23.14 26.3
CDY39500 Canola cytosol 24.0 26.25
CDX82248 Canola endoplasmic reticulum, vacuole 32.86 26.14
CDX95908 Canola plastid 27.14 25.96
CDY51713 Canola cytosol 21.71 25.76
CDY28571 Canola cytosol 16.57 25.66
CDX91854 Canola cytosol 21.71 25.59
CDY28575 Canola golgi 22.0 25.25
CDX81648 Canola plastid 20.57 25.17
CDX74378 Canola cytosol 20.57 25.09
CDY04283 Canola plastid 22.86 25.08
CDY07340 Canola plastid 22.57 24.76
CDY57407 Canola cytosol 21.71 24.52
CDX84705 Canola cytosol 21.43 24.51
CDY12160 Canola cytosol 21.71 24.44
CDY60616 Canola cytosol, mitochondrion, plastid 20.0 24.31
CDX79503 Canola cytosol 21.14 24.26
CDY34004 Canola cytosol 20.57 24.0
CDX93727 Canola endoplasmic reticulum, extracellular, golgi 24.57 23.18
CDX74582 Canola extracellular, golgi, plastid 24.29 22.73
CDX86065 Canola cytosol 20.0 22.22
CDX91855 Canola extracellular, plasma membrane, vacuole 12.57 22.22
CDY39666 Canola endoplasmic reticulum, vacuole 20.86 22.12
CDY07196 Canola cytosol 18.57 21.89
CDY48522 Canola cytosol 17.14 21.51
CDY19307 Canola cytosol 23.43 21.13
CDY44084 Canola cytosol 25.43 21.09
CDX89595 Canola endoplasmic reticulum, plasma membrane, vacuole 26.29 17.9
CDY46265 Canola plasma membrane 23.71 17.66
CDY29329 Canola plasma membrane 23.14 17.2
CDY37377 Canola cytosol, plastid 22.86 16.33
CDY36039 Canola vacuole 30.29 11.51
Protein Annotations
EnsemblPlants:CDX80557EnsemblPlantsGene:GSBRNA2T00133672001Gene3D:2.60.210.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domInterPro:TRAF-likePANTHER:PTHR26379PANTHER:PTHR26379:SF214
PFAM:PF00917PFscan:PS50144ProteinID:CDX80557ProteinID:CDX80557.1SignalP:SignalP-noTMSMART:SM00061
SUPFAM:SSF49599UniParc:UPI0004EDCC9FMapMan:35.2:::
Description
BnaC07g28870D
Coordinates
chrLK031821:+:1319589..1321422
Molecular Weight (calculated)
39834.5 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.275
Length
350 amino acids
Sequence
(BLAST)
001: MDSQKMSLGF LSLAFLFITC SSAEFLIQQV TEGRGTENNS SYNLWANLGV TRVLREERPS SKIVTIAGYS VIKERTELYE SSVFEAAGYK WRLLMYMNGN
101: KNDGGNGYIS LYVRMEETES LPYRWEVNVD LKLFVHNPKQ HKYLAVTDGA VKRFTAAKKE WGFGQLISLA TFQNANQGYI VQDTCSFGAE ILIVKPAEKQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVGDRY WRLGFNPKGD GDGRPHALPI YLYAQGFRPN AVVTNTWGAV NLRLKNQRSS NHRQLYSAAW
301: YPIRSDYGVG VNNIILMKDL KDTSKGYLVN DAIVFEAEMV KVSVTNIVPV
Best Arabidopsis Sequence Match ( AT5G26260.1 )
(BLAST)
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.