Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74378 | Canola | cytosol | 88.22 | 91.29 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 42.42 | 63.64 |
| CDY07146 | Canola | cytosol | 60.94 | 61.36 |
| CDY51713 | Canola | cytosol | 60.94 | 61.36 |
| CDY07196 | Canola | cytosol | 51.52 | 51.52 |
| CDY48522 | Canola | cytosol | 46.13 | 49.1 |
| CDX99123 | Canola | cytosol | 20.2 | 31.25 |
| CDX79503 | Canola | cytosol | 31.99 | 31.15 |
| CDX84705 | Canola | cytosol | 31.31 | 30.39 |
| CDY12160 | Canola | cytosol | 29.97 | 28.62 |
| CDY23783 | Canola | cytosol | 29.63 | 28.57 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 25.93 | 26.74 |
| CDX75913 | Canola | cytosol | 27.27 | 26.21 |
| CDX82371 | Canola | cytosol | 26.94 | 25.89 |
| CDY44083 | Canola | cytosol | 26.6 | 25.08 |
| CDY28571 | Canola | cytosol | 18.86 | 24.78 |
| CDY28575 | Canola | golgi | 24.92 | 24.26 |
| CDY07338 | Canola | plastid | 23.91 | 23.51 |
| CDY70350 | Canola | plastid | 13.47 | 23.39 |
| CDY05324 | Canola | cytosol | 23.57 | 23.33 |
| CDY70349 | Canola | cytosol | 20.54 | 23.11 |
| CDY05531 | Canola | cytosol | 23.23 | 23.08 |
| CDY04290 | Canola | extracellular | 19.87 | 22.96 |
| CDY70520 | Canola | vacuole | 25.25 | 22.59 |
| CDX83143 | Canola | cytosol | 24.24 | 22.5 |
| KRH68153 | Soybean | cytosol | 23.57 | 22.44 |
| CDX81648 | Canola | plastid | 21.55 | 22.38 |
| CDY07340 | Canola | plastid | 23.91 | 22.26 |
| CDY04283 | Canola | plastid | 23.91 | 22.26 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 25.93 | 22.25 |
| CDY43081 | Canola | extracellular, vacuole | 28.62 | 22.25 |
| CDX87055 | Canola | golgi, plasma membrane | 24.92 | 22.22 |
| CDY04288 | Canola | cytosol | 10.44 | 22.14 |
| CDX82252 | Canola | plastid | 26.6 | 22.01 |
| CDY50084 | Canola | extracellular, vacuole | 28.28 | 21.99 |
| CDY36041 | Canola | plasma membrane | 26.26 | 21.91 |
| CDX87056 | Canola | extracellular | 25.25 | 21.87 |
| CDX81956 | Canola | extracellular | 22.56 | 21.82 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 27.95 | 21.78 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 27.95 | 21.78 |
| CDX80557 | Canola | extracellular | 25.59 | 21.71 |
| CDY67361 | Canola | vacuole | 25.59 | 21.71 |
| CDY19777 | Canola | extracellular | 24.92 | 21.51 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 27.27 | 21.49 |
| CDY19775 | Canola | extracellular | 25.25 | 21.43 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.25 | 21.43 |
| CDX88229 | Canola | extracellular | 25.25 | 21.43 |
| CDX87054 | Canola | extracellular | 25.25 | 21.43 |
| CDX82251 | Canola | extracellular, golgi | 28.28 | 21.05 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 26.26 | 21.02 |
| CDX86065 | Canola | cytosol | 22.22 | 20.95 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 23.23 | 20.91 |
| CDX82249 | Canola | plasma membrane, vacuole | 26.94 | 20.89 |
| CDY24977 | Canola | extracellular | 24.58 | 20.8 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 26.94 | 20.78 |
| CDY05532 | Canola | extracellular | 24.24 | 20.51 |
| CDX95908 | Canola | plastid | 25.25 | 20.49 |
| CDY34004 | Canola | cytosol | 20.54 | 20.33 |
| CDY25415 | Canola | vacuole | 27.61 | 20.3 |
| CDY39500 | Canola | cytosol | 21.55 | 20.0 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.92 | 19.79 |
| CDY29822 | Canola | vacuole | 26.6 | 19.6 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 20.2 | 19.48 |
| CDY57407 | Canola | cytosol | 20.2 | 19.35 |
| CDY36040 | Canola | extracellular | 24.58 | 19.31 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 26.94 | 18.18 |
| CDY44084 | Canola | cytosol | 24.24 | 17.06 |
| CDY19307 | Canola | cytosol | 19.87 | 15.21 |
| CDY46265 | Canola | plasma membrane | 23.91 | 15.11 |
| CDY29329 | Canola | plasma membrane | 23.57 | 14.86 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.58 | 14.2 |
| CDY37377 | Canola | cytosol, plastid | 19.19 | 11.63 |
| CDY36039 | Canola | vacuole | 27.27 | 8.79 |
Protein Annotations
| EnsemblPlants:CDX91854 | EnsemblPlantsGene:GSBRNA2T00153470001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDX91854 | ProteinID:CDX91854.1 | SEG:seg | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI0004EE6047 | MapMan:35.2 | : | : | : |
Description
BnaC03g31560D
Coordinates
chrLK031870:+:413691..415947
Molecular Weight (calculated)
33566.5 Da
IEP (calculated)
8.576
GRAVY (calculated)
-0.127
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPISLDEI MAALKEKHKT SHFLKIDTFS LVKKHISRVE SSVFYLGGYK WKLMVYPNGY SGTVNSNVAV SVEKQASVNV NLEVELFVVN QLAKIWHSGG
101: KIGFPPEWTW RGDSDLMSHA NLESKGFLIG DCCIFGVRFF GVEPAASGTA ECFSVIEKPL NHKVTWMMTR FSSFAPEKVH NSHEFVVGNR KWRIQVHPRG
201: FKEGKDKSFS VYLVGGGFIN NVPQIANTYA LFKLRVLDQV NRDHIEKPML GWLGENPGVI QGFPEYMPLS NLGEPYLVND KLYVGVEFEF ISVTNYC
101: KIGFPPEWTW RGDSDLMSHA NLESKGFLIG DCCIFGVRFF GVEPAASGTA ECFSVIEKPL NHKVTWMMTR FSSFAPEKVH NSHEFVVGNR KWRIQVHPRG
201: FKEGKDKSFS VYLVGGGFIN NVPQIANTYA LFKLRVLDQV NRDHIEKPML GWLGENPGVI QGFPEYMPLS NLGEPYLVND KLYVGVEFEF ISVTNYC
001: MSRPIPIEEM VRLFKIRHTT SHLFKIDNFS LLKKHGIEKV ESSVFDLAGH KWKLSVYPNG HKNAKGTHVS MFLVNQVPVN DMPTYELLVV SQLERKWHTH
101: GRDEFDINPE PASEGFLRFI SLADLERKGF LIGDCCMFGV KFHGIEPANP GTAECFSLIE KPLNHKVTWM MSKFSSFNPG KAHQSNEFVV GTRKWRLEVH
201: PRGYMDEKDK SFSVYLSAEG FVNNAPMTKT YAKFKLRVLD QVSWNHVEES GLSWFDAEPS DQSGFADFMP LGKLNEPYLV KDKLYVGVEF EVVSTTYYC
101: GRDEFDINPE PASEGFLRFI SLADLERKGF LIGDCCMFGV KFHGIEPANP GTAECFSLIE KPLNHKVTWM MSKFSSFNPG KAHQSNEFVV GTRKWRLEVH
201: PRGYMDEKDK SFSVYLSAEG FVNNAPMTKT YAKFKLRVLD QVSWNHVEES GLSWFDAEPS DQSGFADFMP LGKLNEPYLV KDKLYVGVEF EVVSTTYYC
Arabidopsis Description
TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ38]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.