Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036572.1-P | Field mustard | extracellular | 99.71 | 99.71 |
| CDX87056 | Canola | extracellular | 97.97 | 98.25 |
| CDX87055 | Canola | golgi, plasma membrane | 74.13 | 76.58 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 75.0 | 74.57 |
| CDY70520 | Canola | vacuole | 68.31 | 70.78 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 71.51 | 70.29 |
| CDY67361 | Canola | vacuole | 70.35 | 69.14 |
| CDX80557 | Canola | extracellular | 70.35 | 69.14 |
| CDX88229 | Canola | extracellular | 70.06 | 68.86 |
| CDY19775 | Canola | extracellular | 69.19 | 68.0 |
| CDX87054 | Canola | extracellular | 69.19 | 68.0 |
| CDY24977 | Canola | extracellular | 68.9 | 67.52 |
| CDY05532 | Canola | extracellular | 68.9 | 67.52 |
| CDX81956 | Canola | extracellular | 59.88 | 67.1 |
| CDY05531 | Canola | cytosol | 55.81 | 64.21 |
| CDY05324 | Canola | cytosol | 53.49 | 61.33 |
| AT5G26320.1 | Thale cress | vacuole | 60.47 | 59.09 |
| CDY70350 | Canola | plastid | 15.7 | 31.58 |
| CDY04288 | Canola | cytosol | 12.5 | 30.71 |
| CDY44083 | Canola | cytosol | 26.74 | 29.21 |
| CDX83143 | Canola | cytosol | 26.45 | 28.44 |
| KRH68153 | Soybean | cytosol | 25.58 | 28.21 |
| CDY04290 | Canola | extracellular | 20.93 | 28.02 |
| CDY70349 | Canola | cytosol | 21.22 | 27.65 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 30.23 | 27.59 |
| CDX82371 | Canola | cytosol | 24.71 | 27.51 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 30.23 | 27.3 |
| CDX75913 | Canola | cytosol | 24.42 | 27.18 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 29.94 | 27.03 |
| CDY07338 | Canola | plastid | 23.55 | 26.82 |
| CDY43081 | Canola | extracellular, vacuole | 29.65 | 26.7 |
| CDX82249 | Canola | plasma membrane, vacuole | 29.65 | 26.63 |
| CDY50084 | Canola | extracellular, vacuole | 29.36 | 26.44 |
| CDY39500 | Canola | cytosol | 24.42 | 26.25 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 23.26 | 25.97 |
| CDY28575 | Canola | golgi | 22.97 | 25.9 |
| CDX82251 | Canola | extracellular, golgi | 29.94 | 25.81 |
| CDX82252 | Canola | plastid | 26.74 | 25.63 |
| CDX99123 | Canola | cytosol | 14.24 | 25.52 |
| CDY36041 | Canola | plasma membrane | 26.16 | 25.28 |
| CDY36040 | Canola | extracellular | 27.62 | 25.13 |
| CDY07146 | Canola | cytosol | 21.51 | 25.08 |
| CDX91854 | Canola | cytosol | 21.51 | 24.92 |
| CDY57407 | Canola | cytosol | 22.38 | 24.84 |
| CDY29822 | Canola | vacuole | 29.07 | 24.81 |
| CDY28571 | Canola | cytosol | 16.28 | 24.78 |
| CDY07340 | Canola | plastid | 22.97 | 24.76 |
| CDY23783 | Canola | cytosol | 22.09 | 24.68 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 27.62 | 24.68 |
| CDY25415 | Canola | vacuole | 28.78 | 24.5 |
| CDY12160 | Canola | cytosol | 22.09 | 24.44 |
| CDX95908 | Canola | plastid | 25.87 | 24.32 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 20.35 | 24.31 |
| CDY04283 | Canola | plastid | 22.38 | 24.14 |
| CDX81648 | Canola | plastid | 20.06 | 24.13 |
| CDY51713 | Canola | cytosol | 20.64 | 24.07 |
| CDX74378 | Canola | cytosol | 20.06 | 24.04 |
| CDX79503 | Canola | cytosol | 21.22 | 23.93 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 29.94 | 23.41 |
| CDX84705 | Canola | cytosol | 20.64 | 23.2 |
| CDY34004 | Canola | cytosol | 20.06 | 23.0 |
| CDY07196 | Canola | cytosol | 19.48 | 22.56 |
| CDY48522 | Canola | cytosol | 18.02 | 22.22 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.79 | 22.22 |
| CDX74582 | Canola | extracellular, golgi, plastid | 22.97 | 21.12 |
| CDY19307 | Canola | cytosol | 22.97 | 20.36 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 21.8 | 20.22 |
| CDY44084 | Canola | cytosol | 23.84 | 19.43 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 18.6 | 19.39 |
| CDX86065 | Canola | cytosol | 17.73 | 19.37 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.16 | 17.51 |
| CDY46265 | Canola | plasma membrane | 23.84 | 17.45 |
| CDY29329 | Canola | plasma membrane | 23.26 | 16.99 |
| CDY37377 | Canola | cytosol, plastid | 22.67 | 15.92 |
| CDY36039 | Canola | vacuole | 29.94 | 11.18 |
Protein Annotations
| EnsemblPlants:CDY19777 | EnsemblPlantsGene:GSBRNA2T00009525001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY19777 | ProteinID:CDY19777.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EE1040 | UniProt:A0A078G446 | MapMan:35.1 | : |
Description
BnaA09g04300DBnaA09g04300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G446]
Coordinates
chrLK032100:+:317182..318981
Molecular Weight (calculated)
39397.7 Da
IEP (calculated)
8.804
GRAVY (calculated)
-0.264
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGRWSLRV ICFAFFFVIT SSSAEFLIQQ VTEYNSSYNL NANLGEVTRE LRSERPSSKI VTIGNFSVVM ERFEPYESSV FEASGYKWRL ILYVTGNKDD
101: GGNNHVSLYV RIEDTDSLPT GWEVMVDLKL FVFNARRHKY LTVTDEAVKR YNQGNREWGF GQLIPLSTFR NPNQGFIVQN TVSFGAEIFI IRPVGQQERV
201: SFVSNPPDNV FTWRILRFSS LEDKIYYSSE FLVGDRFWRL GFNPKGEGEG RPHAIPIFLY AQGFRPNAVE TSTWGAVNLR LRHQLGSNPK RASSAAWYPI
301: QPGHREGVSN IILRKDLQDG YLVKDSIVFE AEMVRVSVTN IVPV
101: GGNNHVSLYV RIEDTDSLPT GWEVMVDLKL FVFNARRHKY LTVTDEAVKR YNQGNREWGF GQLIPLSTFR NPNQGFIVQN TVSFGAEIFI IRPVGQQERV
201: SFVSNPPDNV FTWRILRFSS LEDKIYYSSE FLVGDRFWRL GFNPKGEGEG RPHAIPIFLY AQGFRPNAVE TSTWGAVNLR LRHQLGSNPK RASSAAWYPI
301: QPGHREGVSN IILRKDLQDG YLVKDSIVFE AEMVRVSVTN IVPV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.