Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040903.1-P | Field mustard | extracellular, vacuole | 98.43 | 98.43 |
| CDY43081 | Canola | extracellular, vacuole | 95.29 | 95.29 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 69.11 | 69.29 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 69.11 | 69.29 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 67.8 | 68.34 |
| CDY29822 | Canola | vacuole | 71.73 | 67.99 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 67.02 | 67.9 |
| CDY25415 | Canola | vacuole | 70.94 | 67.08 |
| CDX83143 | Canola | cytosol | 50.79 | 60.62 |
| CDX82251 | Canola | extracellular, golgi | 62.83 | 60.15 |
| CDX82249 | Canola | plasma membrane, vacuole | 60.21 | 60.05 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 68.59 | 59.55 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 58.12 | 57.66 |
| CDX82252 | Canola | plastid | 51.83 | 55.15 |
| CDY36041 | Canola | plasma membrane | 51.05 | 54.78 |
| CDY36040 | Canola | extracellular | 53.93 | 54.5 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 51.05 | 52.0 |
| CDY34004 | Canola | cytosol | 39.79 | 50.67 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 42.41 | 49.09 |
| CDY04288 | Canola | cytosol | 15.97 | 43.57 |
| CDY70350 | Canola | plastid | 19.37 | 43.27 |
| CDY44083 | Canola | cytosol | 35.34 | 42.86 |
| CDX99123 | Canola | cytosol | 21.2 | 42.19 |
| CDY70349 | Canola | cytosol | 28.8 | 41.67 |
| CDY07338 | Canola | plastid | 31.94 | 40.4 |
| CDY04290 | Canola | extracellular | 26.7 | 39.69 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 31.94 | 39.61 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 53.14 | 39.49 |
| CDY28575 | Canola | golgi | 31.41 | 39.34 |
| CDY57407 | Canola | cytosol | 31.41 | 38.71 |
| CDY07340 | Canola | plastid | 32.2 | 38.56 |
| CDY04283 | Canola | plastid | 32.2 | 38.56 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 35.86 | 36.93 |
| CDY28571 | Canola | cytosol | 21.47 | 36.28 |
| CDX81648 | Canola | plastid | 26.7 | 35.66 |
| CDX95908 | Canola | plastid | 33.77 | 35.25 |
| CDY39500 | Canola | cytosol | 29.06 | 34.69 |
| CDX74582 | Canola | extracellular, golgi, plastid | 32.98 | 33.69 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 30.63 | 33.43 |
| CDX86065 | Canola | cytosol | 27.49 | 33.33 |
| CDX82371 | Canola | cytosol | 26.44 | 32.69 |
| CDY67361 | Canola | vacuole | 29.84 | 32.57 |
| CDX80557 | Canola | extracellular | 29.58 | 32.29 |
| CDY19775 | Canola | extracellular | 29.32 | 32.0 |
| CDX87054 | Canola | extracellular | 29.32 | 32.0 |
| CDX88229 | Canola | extracellular | 29.32 | 32.0 |
| CDY05532 | Canola | extracellular | 29.32 | 31.91 |
| CDY24977 | Canola | extracellular | 29.32 | 31.91 |
| CDY05531 | Canola | cytosol | 24.61 | 31.44 |
| CDX75913 | Canola | cytosol | 25.39 | 31.39 |
| CDY70520 | Canola | vacuole | 26.96 | 31.02 |
| CDY44084 | Canola | cytosol | 34.03 | 30.81 |
| CDY05324 | Canola | cytosol | 24.08 | 30.67 |
| CDX87055 | Canola | golgi, plasma membrane | 26.44 | 30.33 |
| KRH68153 | Soybean | cytosol | 24.61 | 30.13 |
| CDX87056 | Canola | extracellular | 26.7 | 29.74 |
| CDY19777 | Canola | extracellular | 26.44 | 29.36 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 26.44 | 29.19 |
| CDY19307 | Canola | cytosol | 29.06 | 28.61 |
| CDX74378 | Canola | cytosol | 21.47 | 28.57 |
| CDX81956 | Canola | extracellular | 22.77 | 28.34 |
| CDX91854 | Canola | cytosol | 21.99 | 28.28 |
| CDY07146 | Canola | cytosol | 20.94 | 27.12 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 13.87 | 26.77 |
| CDY29329 | Canola | plasma membrane | 32.98 | 26.75 |
| CDY46265 | Canola | plasma membrane | 32.72 | 26.6 |
| CDY51713 | Canola | cytosol | 20.16 | 26.1 |
| CDY07196 | Canola | cytosol | 20.16 | 25.93 |
| CDY36039 | Canola | vacuole | 60.47 | 25.08 |
| CDY48522 | Canola | cytosol | 17.28 | 23.66 |
| CDX79503 | Canola | cytosol | 18.59 | 23.28 |
| CDY37377 | Canola | cytosol, plastid | 29.84 | 23.27 |
| CDX84705 | Canola | cytosol | 18.59 | 23.2 |
| CDY12160 | Canola | cytosol | 18.59 | 22.83 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 15.71 | 20.83 |
| CDY23783 | Canola | cytosol | 16.23 | 20.13 |
Protein Annotations
| Gene3D:2.60.210.10 | MapMan:35.2 | UniProt:A0A078IL46 | EnsemblPlants:CDY50084 | ProteinID:CDY50084 | ProteinID:CDY50084.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00095866001 | InterPro:IPR002083 | InterPro:IPR008974 |
| InterPro:MATH/TRAF_dom | PFAM:PF00917 | PFscan:PS50144 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 | SMART:SM00061 |
| SUPFAM:SSF49599 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:TRAF-like | UniParc:UPI0004EE1A69 | SEG:seg |
Description
BnaC01g32590DBnaC01g32590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IL46]
Coordinates
chrLK032879:-:9776..11847
Molecular Weight (calculated)
43760.3 Da
IEP (calculated)
8.448
GRAVY (calculated)
-0.428
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNHYTNTVS TVLLLVFLFI SSASSSTFIR QYTDGFNKNF QQENGAVPDS IRGEAHYLRQ HEQEISSRDY KLSAASTVKG LRDRPPSSYS LKMESFNTLL
101: KSTNADKYVS RPFSAAGYKW TLVVYPNGNK NDNGAGFLSL YVAIDNSTLS PHQEVFVDLR FYVFNRVEKK YLTIQDTDGW RFSYFKTMWG FSQVLPVNTF
201: KDSNNGYLYD GDHCEFGVDV TTPTVFKESE LFTVTDKFYN PKYTWSIQKF STLLEDSYYS DVFSIGGRRW NIKVYPGGCA TGKGKAVSMF LILNANEKFR
301: PYEKIYVGAK LRVLNQRNFN NVEKQIDNWY NGPGYGDGYG WGYYEFIPFS DLKDSSKGFL VNDVLMVQVE IEAISSTKYF PS
101: KSTNADKYVS RPFSAAGYKW TLVVYPNGNK NDNGAGFLSL YVAIDNSTLS PHQEVFVDLR FYVFNRVEKK YLTIQDTDGW RFSYFKTMWG FSQVLPVNTF
201: KDSNNGYLYD GDHCEFGVDV TTPTVFKESE LFTVTDKFYN PKYTWSIQKF STLLEDSYYS DVFSIGGRRW NIKVYPGGCA TGKGKAVSMF LILNANEKFR
301: PYEKIYVGAK LRVLNQRNFN NVEKQIDNWY NGPGYGDGYG WGYYEFIPFS DLKDSSKGFL VNDVLMVQVE IEAISSTKYF PS
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.