Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57407 | Canola | cytosol | 45.51 | 71.94 |
| CDY70350 | Canola | plastid | 19.18 | 54.97 |
| CDY04288 | Canola | cytosol | 14.69 | 51.43 |
| CDY44083 | Canola | cytosol | 31.22 | 48.57 |
| CDY70349 | Canola | cytosol | 26.12 | 48.48 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 28.78 | 45.78 |
| CDY04290 | Canola | extracellular | 23.47 | 44.75 |
| AT3G22085.1 | Thale cress | cytosol | 26.33 | 44.33 |
| CDY28575 | Canola | golgi | 27.14 | 43.61 |
| CDY28571 | Canola | cytosol | 19.8 | 42.92 |
| CDY39500 | Canola | cytosol | 27.76 | 42.5 |
| CDX81648 | Canola | plastid | 24.69 | 42.31 |
| CDX95908 | Canola | plastid | 31.43 | 42.08 |
| CDY07338 | Canola | plastid | 25.92 | 42.05 |
| CDY07340 | Canola | plastid | 27.14 | 41.69 |
| CDY04283 | Canola | plastid | 27.14 | 41.69 |
| CDY44084 | Canola | cytosol | 32.04 | 37.2 |
| CDY19307 | Canola | cytosol | 27.55 | 34.79 |
| CDX82252 | Canola | plastid | 24.29 | 33.15 |
| CDY36041 | Canola | plasma membrane | 24.08 | 33.15 |
| CDX83143 | Canola | cytosol | 21.43 | 32.81 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 24.49 | 31.83 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 24.29 | 31.23 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 24.08 | 30.97 |
| CDY50084 | Canola | extracellular, vacuole | 23.27 | 29.84 |
| CDY43081 | Canola | extracellular, vacuole | 23.06 | 29.58 |
| CDX82251 | Canola | extracellular, golgi | 23.67 | 29.07 |
| CDX82249 | Canola | plasma membrane, vacuole | 22.65 | 28.98 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 22.24 | 28.31 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 24.69 | 27.5 |
| CDY25415 | Canola | vacuole | 22.45 | 27.23 |
| CDY29822 | Canola | vacuole | 22.24 | 27.05 |
| CDX99123 | Canola | cytosol | 10.41 | 26.56 |
| CDX82371 | Canola | cytosol | 16.73 | 26.54 |
| CDX75913 | Canola | cytosol | 16.73 | 26.54 |
| CDY34004 | Canola | cytosol | 15.92 | 26.0 |
| KRH68153 | Soybean | cytosol | 16.53 | 25.96 |
| CDY36040 | Canola | extracellular | 20.0 | 25.93 |
| CDX74582 | Canola | extracellular, golgi, plastid | 19.59 | 25.67 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 19.18 | 25.34 |
| CDX87055 | Canola | golgi, plasma membrane | 16.33 | 24.02 |
| CDY67361 | Canola | vacuole | 17.14 | 24.0 |
| CDY05531 | Canola | cytosol | 14.49 | 23.75 |
| CDX88229 | Canola | extracellular | 16.94 | 23.71 |
| CDX87054 | Canola | extracellular | 16.94 | 23.71 |
| CDY24977 | Canola | extracellular | 16.94 | 23.65 |
| CDY19775 | Canola | extracellular | 16.73 | 23.43 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 16.73 | 23.43 |
| CDY05532 | Canola | extracellular | 16.73 | 23.36 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 16.33 | 23.12 |
| CDX80557 | Canola | extracellular | 16.33 | 22.86 |
| CDX87056 | Canola | extracellular | 15.92 | 22.74 |
| CDY19777 | Canola | extracellular | 15.92 | 22.67 |
| CDY05324 | Canola | cytosol | 13.88 | 22.67 |
| CDY29329 | Canola | plasma membrane | 21.43 | 22.29 |
| CDY46265 | Canola | plasma membrane | 21.22 | 22.13 |
| CDY70520 | Canola | vacuole | 14.9 | 21.99 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 14.49 | 21.52 |
| CDY07146 | Canola | cytosol | 12.65 | 21.02 |
| CDY51713 | Canola | cytosol | 12.45 | 20.68 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.63 | 20.62 |
| CDX81956 | Canola | extracellular | 12.86 | 20.52 |
| CDX86065 | Canola | cytosol | 12.65 | 19.68 |
| CDX91854 | Canola | cytosol | 11.63 | 19.19 |
| CDY07196 | Canola | cytosol | 11.63 | 19.19 |
| CDX74378 | Canola | cytosol | 11.02 | 18.82 |
| CDX79503 | Canola | cytosol | 11.22 | 18.03 |
| CDY48522 | Canola | cytosol | 10.2 | 17.92 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 7.14 | 17.68 |
| CDX84705 | Canola | cytosol | 11.02 | 17.65 |
| CDY23783 | Canola | cytosol | 10.82 | 17.21 |
| CDY12160 | Canola | cytosol | 10.82 | 17.04 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 9.59 | 16.32 |
| CDY36039 | Canola | vacuole | 25.71 | 13.68 |
Protein Annotations
| EnsemblPlants:CDY37377 | EnsemblPlantsGene:GSBRNA2T00063936001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY37377 | ProteinID:CDY37377.1 | SUPFAM:SSF49599 | UniParc:UPI0004EDC002 |
| UniProt:A0A078HHN5 | MapMan:35.2 | : | : | : | : |
Description
BnaC05g30530DBnaC05g30530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HHN5]
Coordinates
chrLK032399:+:27528..39074
Molecular Weight (calculated)
56349.1 Da
IEP (calculated)
9.269
GRAVY (calculated)
-0.507
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKKEKSCFV SDSTITSKFG DRPPSTYSMK IQNLSQLKTL FSETGGYKSR TFSSGKYNWR LVIYPNGNEK DNGTGFISTY VELDSTALES TVLAYLTFFV
101: YNKKENKYFT IQERLTRNLQ EDQNTLRGGT RPIELGLGDV EGKQFNALRP VRGFPQVLPL DTFNDPKNGY VFNGDQCEFG VDVMKPSNPK FSWTVNKFSK
201: LKEHHYISSK FLIGGRNWVL ELYPKGYNTT YSTWLSLFLH LAEGEKMKTG EEIYTQCCDL RILDPFGCNH MTRKSATECW ITKSHGSYQI LPLLACLEIV
301: LLTYSMKIQN LSQLKTSLSG SDVYKSRTFS SGKYNWRLVI YPKGNKKDNG AGFNFTLWKP FNALRPVHGF PQVLPLDTFN DYKDGYAFDG NQWEFSVDVM
401: VRLTNWEVVS FTQKPSKPDF CWTVNKFSKL KEHRYGHVVV SQGRDYIRSQ IDIHLSEVKP DKDTLKAGEQ IYTKADVRIL THLESLDKEV
101: YNKKENKYFT IQERLTRNLQ EDQNTLRGGT RPIELGLGDV EGKQFNALRP VRGFPQVLPL DTFNDPKNGY VFNGDQCEFG VDVMKPSNPK FSWTVNKFSK
201: LKEHHYISSK FLIGGRNWVL ELYPKGYNTT YSTWLSLFLH LAEGEKMKTG EEIYTQCCDL RILDPFGCNH MTRKSATECW ITKSHGSYQI LPLLACLEIV
301: LLTYSMKIQN LSQLKTSLSG SDVYKSRTFS SGKYNWRLVI YPKGNKKDNG AGFNFTLWKP FNALRPVHGF PQVLPLDTFN DYKDGYAFDG NQWEFSVDVM
401: VRLTNWEVVS FTQKPSKPDF CWTVNKFSKL KEHRYGHVVV SQGRDYIRSQ IDIHLSEVKP DKDTLKAGEQ IYTKADVRIL THLESLDKEV
001: MMCHGRKVKM RDNEMSQIRQ SLIPTGTEVS AGDGERRRCK TPEGQREKVV SDNDFVEEDC VLSKGGELLF GFDITQLLGQ QNWQGDSTIV NNLREHPPSS
101: YSLKINKLSQ LTFDKYESHR FLSGGYNWRL VIYPKGNEKD KGSGFISMYV EFDNTKVSST SPMEVFAYII FFVYNKKENK YFTIQDVEVK RFNALRTVWG
201: LSQVLSLETF NDLENGYTFE GEQCEFGVDV MVASPITKWE VVSFDEKLDI LKFSWSVKDF SVLKEEFYVS ERFSMGGRLW DLQMYPKGDP RRDKKWLSIF
301: LRLSGSETLT VDEKIYVIAH LRVLDPLGNW FRDRNKGWGY LEFLSFSKLR KSYLDLEDTF FPLNL
101: YSLKINKLSQ LTFDKYESHR FLSGGYNWRL VIYPKGNEKD KGSGFISMYV EFDNTKVSST SPMEVFAYII FFVYNKKENK YFTIQDVEVK RFNALRTVWG
201: LSQVLSLETF NDLENGYTFE GEQCEFGVDV MVASPITKWE VVSFDEKLDI LKFSWSVKDF SVLKEEFYVS ERFSMGGRLW DLQMYPKGDP RRDKKWLSIF
301: LRLSGSETLT VDEKIYVIAH LRVLDPLGNW FRDRNKGWGY LEFLSFSKLR KSYLDLEDTF FPLNL
Arabidopsis Description
TRAF-like family protein [Source:UniProtKB/TrEMBL;Acc:Q9ZQE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.