Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009895.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 100.0 | 100.0 |
| CDX80557 | Canola | extracellular | 97.14 | 97.14 |
| CDY70520 | Canola | vacuole | 87.14 | 91.87 |
| CDY67361 | Canola | vacuole | 90.86 | 90.86 |
| CDX88229 | Canola | extracellular | 89.43 | 89.43 |
| CDX87054 | Canola | extracellular | 87.43 | 87.43 |
| CDX81956 | Canola | extracellular | 76.29 | 86.97 |
| CDY19775 | Canola | extracellular | 86.57 | 86.57 |
| CDY24977 | Canola | extracellular | 86.0 | 85.75 |
| CDY05532 | Canola | extracellular | 86.0 | 85.75 |
| CDY05531 | Canola | cytosol | 70.29 | 82.27 |
| CDY05324 | Canola | cytosol | 66.57 | 77.67 |
| AT5G26320.1 | Thale cress | vacuole | 72.29 | 71.88 |
| CDX87056 | Canola | extracellular | 70.29 | 71.72 |
| CDY19777 | Canola | extracellular | 70.29 | 71.51 |
| CDX87055 | Canola | golgi, plasma membrane | 66.86 | 70.27 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 69.14 | 69.94 |
| CDY04288 | Canola | cytosol | 13.43 | 33.57 |
| CDY70350 | Canola | plastid | 15.71 | 32.16 |
| CDX99123 | Canola | cytosol | 16.86 | 30.73 |
| CDY70349 | Canola | cytosol | 23.14 | 30.68 |
| CDY43081 | Canola | extracellular, vacuole | 33.43 | 30.63 |
| CDY50084 | Canola | extracellular, vacuole | 33.43 | 30.63 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 32.86 | 30.5 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 32.86 | 30.18 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 32.57 | 29.92 |
| KRH68153 | Soybean | cytosol | 26.57 | 29.81 |
| CDX82371 | Canola | cytosol | 26.29 | 29.77 |
| CDX75913 | Canola | cytosol | 26.29 | 29.77 |
| CDX83143 | Canola | cytosol | 27.14 | 29.69 |
| CDY44083 | Canola | cytosol | 26.57 | 29.52 |
| CDX82252 | Canola | plastid | 30.0 | 29.25 |
| CDY36041 | Canola | plasma membrane | 29.71 | 29.21 |
| CDY04290 | Canola | extracellular | 20.86 | 28.4 |
| CDX82249 | Canola | plasma membrane, vacuole | 30.29 | 27.68 |
| CDY07338 | Canola | plastid | 23.71 | 27.48 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 24.0 | 27.27 |
| CDX82251 | Canola | extracellular, golgi | 30.86 | 27.07 |
| CDY25415 | Canola | vacuole | 31.14 | 26.98 |
| CDY23783 | Canola | cytosol | 23.71 | 26.95 |
| CDY39500 | Canola | cytosol | 24.57 | 26.88 |
| CDY29822 | Canola | vacuole | 30.86 | 26.8 |
| CDY07146 | Canola | cytosol | 22.57 | 26.78 |
| CDY36040 | Canola | extracellular | 28.86 | 26.72 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 33.43 | 26.59 |
| CDX95908 | Canola | plastid | 27.71 | 26.5 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 28.86 | 26.23 |
| CDY28571 | Canola | cytosol | 16.86 | 26.11 |
| CDY04283 | Canola | plastid | 23.71 | 26.02 |
| CDY28575 | Canola | golgi | 22.57 | 25.9 |
| CDX81648 | Canola | plastid | 21.14 | 25.87 |
| CDY51713 | Canola | cytosol | 21.71 | 25.76 |
| CDY07340 | Canola | plastid | 23.43 | 25.71 |
| CDY57407 | Canola | cytosol | 22.57 | 25.48 |
| CDX91854 | Canola | cytosol | 21.43 | 25.25 |
| CDX84705 | Canola | cytosol | 22.0 | 25.16 |
| CDX79503 | Canola | cytosol | 21.71 | 24.92 |
| CDX74378 | Canola | cytosol | 20.29 | 24.74 |
| CDY12160 | Canola | cytosol | 21.71 | 24.44 |
| CDY34004 | Canola | cytosol | 20.86 | 24.33 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 19.71 | 23.96 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 24.57 | 23.18 |
| CDX74582 | Canola | extracellular, golgi, plastid | 24.57 | 22.99 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 21.14 | 22.42 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.57 | 22.22 |
| CDX86065 | Canola | cytosol | 19.71 | 21.9 |
| CDY07196 | Canola | cytosol | 18.57 | 21.89 |
| CDY44084 | Canola | cytosol | 26.0 | 21.56 |
| CDY48522 | Canola | cytosol | 17.14 | 21.51 |
| CDY19307 | Canola | cytosol | 23.71 | 21.39 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 26.57 | 18.09 |
| CDY46265 | Canola | plasma membrane | 24.0 | 17.87 |
| CDY29329 | Canola | plasma membrane | 23.43 | 17.41 |
| CDY37377 | Canola | cytosol, plastid | 23.43 | 16.73 |
| CDY36039 | Canola | vacuole | 30.57 | 11.62 |
Protein Annotations
| EnsemblPlants:CDY67101 | EnsemblPlantsGene:GSBRNA2T00058832001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF214 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY67101 | ProteinID:CDY67101.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | UniParc:UPI000253F3CA | UniProt:A0A078JMU3 | MapMan:35.2 | : | : |
Description
BnaA06g39530DBnaA06g39530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMU3]
Coordinates
chrLK035757:+:3065..4824
Molecular Weight (calculated)
39519.1 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.266
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSQKMSLGF LSLAFLFITC SSAEFLIQQV TEGRGTENNS SYNLQANLGV TRVLREERPS SKIVTIAGYS VIKERTEVYE SSVFEAAGYK WRLVMYMNGN
101: KNDGGNGYIS LYVRMEETES LPYGWEVNVD LKLFVHNPKQ HKYLAVTDGA VKRFSAAKKE WGFGQLIALS TFQNANQGYI VQDTCSFGAE ILIVKPAEKQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVGDRY WRLGFNPKGD GDGRPHALPI YLYAQGFRPN AVATNTWGAV NLRLKNQRGS NHRQLYSAAW
301: YPIRSGYGVG VNNIILMKDL KDTSKGYLVN DAIVFEAEMV KVSVTNIVPV
101: KNDGGNGYIS LYVRMEETES LPYGWEVNVD LKLFVHNPKQ HKYLAVTDGA VKRFSAAKKE WGFGQLIALS TFQNANQGYI VQDTCSFGAE ILIVKPAEKQ
201: EKVTFISNPP NNVFTWKILR FSTLEDKFYY SDDFLVGDRY WRLGFNPKGD GDGRPHALPI YLYAQGFRPN AVATNTWGAV NLRLKNQRGS NHRQLYSAAW
301: YPIRSGYGVG VNNIILMKDL KDTSKGYLVN DAIVFEAEMV KVSVTNIVPV
001: MDSHKWSLGF TLLAFLFITS SSAELIIKQV TQGRGIEYNN SYSLTSNLGV TTRELRDERP SSKIVTITSF SVIKDRGEPY ESSIFEAAGY KWRLVLYVKG
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
101: NPKGGINNHI SLYARIEETE TLPRGWEVNV DLKLFVHNRK LKKYLSVTDG TVKRYNDAKK EWGFTQLISL PTFYNANEGY LVQDTASFGA EIFIVNPTEK
201: QEKVTFISNP PDNVFTWKIL RFSTLEDKFY YSDDFLVGDR YWRLGFNPKG SGGGRPHALP IFLYAQGHKA NAVVTNTWGA VNLRLKNQRS SNHKQLYSAA
301: WYPIRSDYGV GVNNIILMSE LKDASKGYMV NDAIIFEAEM VKVSVTNIVS V
Arabidopsis Description
F9D12.8 protein [Source:UniProtKB/TrEMBL;Acc:O81493]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.