Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25415 | Canola | vacuole | 93.05 | 92.82 |
| CDY43081 | Canola | extracellular, vacuole | 68.24 | 71.99 |
| CDY50084 | Canola | extracellular, vacuole | 67.99 | 71.73 |
| CDX82246 | Canola | endoplasmic reticulum, extracellular | 65.01 | 69.5 |
| CDY43080 | Canola | endoplasmic reticulum, vacuole | 65.51 | 69.29 |
| CDY50083 | Canola | endoplasmic reticulum, vacuole | 64.76 | 68.5 |
| AT3G20370.1 | Thale cress | extracellular, plasma membrane | 62.78 | 66.75 |
| CDX82251 | Canola | extracellular, golgi | 62.53 | 63.16 |
| CDX82249 | Canola | plasma membrane, vacuole | 59.06 | 62.14 |
| CDX83143 | Canola | cytosol | 48.39 | 60.94 |
| CDX82248 | Canola | endoplasmic reticulum, vacuole | 65.01 | 59.55 |
| CDY50282 | Canola | endoplasmic reticulum, vacuole | 56.82 | 59.48 |
| CDY36040 | Canola | extracellular | 54.59 | 58.2 |
| CDX82252 | Canola | plastid | 51.12 | 57.38 |
| CDY36041 | Canola | plasma membrane | 50.37 | 57.02 |
| AT3G20380.1 | Thale cress | extracellular, vacuole | 50.87 | 54.67 |
| CDY34004 | Canola | cytosol | 37.47 | 50.33 |
| CDY39666 | Canola | endoplasmic reticulum, vacuole | 38.71 | 47.27 |
| CDY70350 | Canola | plastid | 18.61 | 43.86 |
| CDY04288 | Canola | cytosol | 14.89 | 42.86 |
| CDY44083 | Canola | cytosol | 32.75 | 41.9 |
| CDY70349 | Canola | cytosol | 26.8 | 40.91 |
| CDX99123 | Canola | cytosol | 18.86 | 39.58 |
| CDX89595 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.13 | 38.52 |
| CDY57407 | Canola | cytosol | 29.53 | 38.39 |
| CDY58708 | Canola | cytosol, nucleus, plastid | 29.28 | 38.31 |
| CDY07338 | Canola | plastid | 28.29 | 37.75 |
| CDY28575 | Canola | golgi | 28.04 | 37.05 |
| CDX93727 | Canola | endoplasmic reticulum, extracellular, golgi | 33.5 | 36.39 |
| CDY04290 | Canola | extracellular | 23.08 | 36.19 |
| CDX95908 | Canola | plastid | 32.26 | 35.52 |
| CDY28571 | Canola | cytosol | 19.85 | 35.4 |
| CDY07340 | Canola | plastid | 27.79 | 35.11 |
| CDY04283 | Canola | plastid | 27.79 | 35.11 |
| CDX74582 | Canola | extracellular, golgi, plastid | 32.51 | 35.03 |
| CDY39500 | Canola | cytosol | 27.79 | 35.0 |
| CDX81648 | Canola | plastid | 24.57 | 34.62 |
| CDX82371 | Canola | cytosol | 24.07 | 31.39 |
| CDX86065 | Canola | cytosol | 24.32 | 31.11 |
| CDX87055 | Canola | golgi, plasma membrane | 25.56 | 30.93 |
| CDY67101 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.8 | 30.86 |
| CDY19776 | Canola | extracellular, plasma membrane, vacuole | 26.05 | 30.35 |
| CDX80557 | Canola | extracellular | 26.3 | 30.29 |
| CDX75913 | Canola | cytosol | 23.08 | 30.1 |
| CDX87054 | Canola | extracellular | 26.05 | 30.0 |
| CDY19775 | Canola | extracellular | 25.81 | 29.71 |
| CDY44084 | Canola | cytosol | 31.02 | 29.62 |
| CDY67361 | Canola | vacuole | 25.56 | 29.43 |
| CDY19307 | Canola | cytosol | 28.29 | 29.38 |
| CDY24977 | Canola | extracellular | 25.56 | 29.34 |
| CDY05532 | Canola | extracellular | 25.56 | 29.34 |
| CDX87056 | Canola | extracellular | 24.81 | 29.15 |
| CDY19777 | Canola | extracellular | 24.81 | 29.07 |
| CDX88229 | Canola | extracellular | 25.06 | 28.86 |
| CDY05531 | Canola | cytosol | 21.34 | 28.76 |
| KRH68153 | Soybean | cytosol | 22.08 | 28.53 |
| CDY05324 | Canola | cytosol | 21.09 | 28.33 |
| CDY70520 | Canola | vacuole | 23.33 | 28.31 |
| CDY29329 | Canola | plasma membrane | 32.51 | 27.81 |
| CDY46265 | Canola | plasma membrane | 32.26 | 27.66 |
| CDX81956 | Canola | extracellular | 20.35 | 26.71 |
| CDX91854 | Canola | cytosol | 19.6 | 26.6 |
| CDX74378 | Canola | cytosol | 18.86 | 26.48 |
| CDY36039 | Canola | vacuole | 59.06 | 25.84 |
| CDY07146 | Canola | cytosol | 18.86 | 25.76 |
| CDY51713 | Canola | cytosol | 18.61 | 25.42 |
| CDX91855 | Canola | extracellular, plasma membrane, vacuole | 12.41 | 25.25 |
| CDY07196 | Canola | cytosol | 16.63 | 22.56 |
| CDY12160 | Canola | cytosol | 17.37 | 22.51 |
| CDY37377 | Canola | cytosol, plastid | 27.05 | 22.24 |
| CDX84705 | Canola | cytosol | 16.63 | 21.9 |
| CDY23783 | Canola | cytosol | 16.63 | 21.75 |
| CDX79503 | Canola | cytosol | 16.38 | 21.64 |
| CDY48522 | Canola | cytosol | 14.89 | 21.51 |
| CDY60616 | Canola | cytosol, mitochondrion, plastid | 14.39 | 20.14 |
Protein Annotations
| EnsemblPlants:CDY29822 | EnsemblPlantsGene:GSBRNA2T00043716001 | Gene3D:2.60.210.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002083 | InterPro:IPR008974 | InterPro:MATH/TRAF_dom | InterPro:TRAF-like | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF213 |
| PFAM:PF00917 | PFscan:PS50144 | ProteinID:CDY29822 | ProteinID:CDY29822.1 | SignalP:SignalP-noTM | SMART:SM00061 |
| SUPFAM:SSF49599 | TMHMM:TMhelix | UniParc:UPI0004EF1E13 | UniProt:A0A078GX94 | MapMan:35.2 | : |
Description
BnaC05g31680DBnaC05g31680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX94]
Coordinates
chrLK032244:+:369190..371411
Molecular Weight (calculated)
46334.3 Da
IEP (calculated)
8.472
GRAVY (calculated)
-0.505
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSHYTKTVS AVFLLFCLFI TSGSSSSFIR QVTDDFNTNL QLEDGDGPDP IQGEAHYLPK HVQDGDEPDP VQGEEHYLHN HDQEISSRDY KVSASNAVVK
101: GLRSRPPSSY SLKMESFNTL LKSKYSERYV SRPFSAAGYN WTLVVYPNGN KNDKGSGYLS LYAAIDNSTL APHEEVYVDL RFYVFNKKEK KYFTIQDTDV
201: WRYNIFKTMW GFSQVLPGYT FKSPYNGYLY DGDHCEFGVD VTIPTVFQTS ELFTVANNFK TPTFTWRLLK FSTLLGDTYF SDVFSIGGRR WNIQVNPSGR
301: DKGKGKALSM YLIVNPNEEL RPYERIYVRA KLRVLNKFKF RNVERQIDNW FSHRETGRAY GWGSSEFVTL SDLRDSSKGF LVDDKLTVQV VIEAVSTTKY
401: FPS
101: GLRSRPPSSY SLKMESFNTL LKSKYSERYV SRPFSAAGYN WTLVVYPNGN KNDKGSGYLS LYAAIDNSTL APHEEVYVDL RFYVFNKKEK KYFTIQDTDV
201: WRYNIFKTMW GFSQVLPGYT FKSPYNGYLY DGDHCEFGVD VTIPTVFQTS ELFTVANNFK TPTFTWRLLK FSTLLGDTYF SDVFSIGGRR WNIQVNPSGR
301: DKGKGKALSM YLIVNPNEEL RPYERIYVRA KLRVLNKFKF RNVERQIDNW FSHRETGRAY GWGSSEFVTL SDLRDSSKGF LVDDKLTVQV VIEAVSTTKY
401: FPS
001: MMSYHYINTL CIVISLLSCL FITSSFAGPV PNQENGSQKI FPTQISSRDS KVSLSSTVKG LRERPPSSYS LKMESFNTLM KSVYTERYES RPFRVGRYNW
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
101: TLVVYPKGNK NDNGTGHISL YVVLDNSTLT SQSEEVHVDL RFYVFNKKET KYFTIQDTDV WRFSAIKRMW GFSKVLPLIT FNNLKNGYLY DVDHCEFGVD
201: VIIPPFYEKS EVFSVTKSFP SPRFTWYIQG YSTLPTDYLS EEFIIGGKSW NLRIFKNGFG AFEGKNLSLY LNLGPQELLK AKPYDKVYVR AKLRVPNQFG
301: SQSNLVLERP LDNWFSPQTI GWGYADFMPL SDLRNSSKGF LVNDMLVVQV AMEEISSTNY LPK
Arabidopsis Description
AT3g20360/MQC12_11 [Source:UniProtKB/TrEMBL;Acc:Q8W0Z1]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.